Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00706 ATGTATCCTGGTGGTTATACTGCTGAAGTTACAAACATATCCCCAAGAGCTACAGAGGACGATGTGCACAACTTTTTTGCATACAGTGGTGTGATTGAGCGTGTTGATGTAATAAGATCCAGTGACTATGCTTCTACTGCATATGTGACTTTTAGGGATGCTTATGCCCTGGAAACTGCATTATTGCTGAATGGATCCATGATTTTGGACCAATGCATATCCATTTCACGCTGGGGAGCCTACGCAGATGACTGCAATAGTTGGAACAGTCATGCATCAAAGCCTGAAGACAGTATTACAACCTCACAAGATATGCACATGGATAAGTTTGTTTCATCCCCTGGAGAAGCAATCACTATGGCCCAAGAGGTTGTCAAAATAATGGTTGCTAAGGGATATGTGTTGGGCAAAGATGCATTTGTCATGGCAAAAGCCTTTGATGAATCCCATAATGTATCATCTACAGCAGCATCCAAGGTTGCTGAACTCAGCAATAAAATTGGGCTGACTGATACCATTAATTCAGGCATTGAAACTTTCAAATCTGTGGATGAGCAGTATCATGTTACAGACATCACCAAATCAGCTGCAGCAGTGACAGGGACAACAGCTATAGTTGTGGCAACAGTTACAGGGAAAGCAGCTGTGGCAGCTGGTAATGCTATAGTCAACAGCAGATACTTTGCAAAAGGAGCTCTCTTTGTTTCAGATATGTTAAGTCGTGCAGCAAAAGCAGCTGCTGATTTGGGTCATGATGAAAATAAATGA 768 0.4219 MYPGGYTAEVTNISPRATEDDVHNFFAYSGVIERVDVIRSSDYASTAYVTFRDAYALETALLLNGSMILDQCISISRWGAYADDCNSWNSHASKPEDSITTSQDMHMDKFVSSPGEAITMAQEVVKIMVAKGYVLGKDAFVMAKAFDESHNVSSTAASKVAELSNKIGLTDTINSGIETFKSVDEQYHVTDITKSAAAVTGTTAIVVATVTGKAAVAAGNAIVNSRYFAKGALFVSDMLSRAAKAAADLGHDENK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00706 255 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 6 251 - -
Rops8g00706 255 Gene3D - 3 83 IPR012677 -
Rops8g00706 255 SMART rrm1_1 7 76 IPR000504 GO:0003723
Rops8g00706 255 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 73 IPR000504 GO:0003723
Rops8g00706 255 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 80 IPR000504 GO:0003723
Rops8g00706 255 SUPERFAMILY RNA-binding domain, RBD 5 79 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00706 Rops-Chr8 14409200 14415258 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00706 - - gmx:100784005 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00706 8 14409200 14415258 Rops8g00706 8 14409200 14415258 ECH