Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00646 ATGAAGTTTGGGAAAGAATTTGTCTCACAAATGGTGCCAGAATGGCAAGAAGCATACATGGATTACAACTCTCTCAAAGCTATTCTGAAAGACATGTCAAGGCTTAGGCAGAGAAATGAATCATCAGCACCAATGGCATCCACACCAAAAGGTTCTTTGAAGAGAAGGTTAACTCTTTATAGAGCCTTTAGTGGTCTTACTGGTAGACAAAGAGGATCTCCCATGAATAATGAAGATGAAGTTATACTTGTTCGTGCAGAAGAGGGTGAAGGTTCAGAAGGGTTGTACCAGACCATGTTTCTTAAGCCTTCTGAAGAAGGGGCAGAAAGAGATGTTGAGTTTTTCAAGAAACTTGATCATGAGTTTAACAAGGTCAATAACTTCTACAAGAAGATGGTGAAGGAAGTTGTTGAAGAGGCAGATGAGCTGAGTAAGCAAATGAATGCTTTGATTGCTTTCAGGATAAAGGTGGATAAGGTGGGGTTCAGAAATCTTGCTAGCAATGGGACCTCAACTTTTGCAACTTCCATGATGCATCATACAAATGATGCTAGACCTGGTCACTCGCGTCCACGCATGGATGTGATTCATGAAGTTGAGATGAGCAATGGAAGGCATTTGGATTATGGAAGTGGAAATCATGTGGAACAAACCACTTCTAGAACTTCCACAGAGGGATTTAGACCAGCTTCATTGGAGATCCTAGATCATGTGAAGATCAATGTGACCACGCCAGAAACTCCTGTATCAACCATAAAAGGGCTTTTCTTGAGTTCAAAATCCGATCATTCATTTAGCAAGCAAGAGCTGAAGAAAGCGGAGGAACAAATTAGCATAGCCTTAAAGGAATTCTATCATAAGCTTCGGCTTCTAAAAAGCTATAGCTTCTTAAACTTGTTGGCATTCTCAAAAATCATGAAGAAGTATGATAAGGTCACTTCAAGGAATGCATCAAAGGATTACTTAAAGATGGTGGACAGTTCTTATGTTGGCAGCTCAGAAGAGGTTAATAGGCTCATGGAAAGGGTTGAGCATGCCTTCATTAAACACTTTTCAAATGGGAATCACAGAAAAGGAATGAACACATTGAGACCAACTGCTAAGAGGGAGAGACATAGAATTACATTCTTATTGGGGTTGTTTACTGGCTGCTCAATTGCTCTCATTGTGGCACTCGTTGTACTCATACACGCAAGAAAAATTCTAAATAGTGAGGGTCGTACTACATATATGGACAACATATTTCCTCTTTATAGTCTCTTTGGATTCATCGTCTTACATATGATCATCTACTCTGCAAATGTATACTTCTGGAGGCATTTTAAAATCAACTACCCCTTTATATTTGGCTTCAAGCAAGGAACAGAATTGGGTTACAGAGAAGTCTTTCTTCTTAGCTCTGGTCTTGCAGTACTCTCATTGGCTGCAGTTCTCTCAAACTTGGATATGGAGATGGACCAGAGAACAAAAAGTTTCTCAGCATTAACAGAATTAGTACCTTTAGGCCTTGTCATAGTGCTGCTTCTTATAACATTTTGTCCCTTCAACATCATATATAAATCCAGCCGCTTCTTCCTTATTCAATGTGCATTTCATTGTATTTGTGCTCCTCTTTACAAGGTCAACTTCCCAGATAATTTCTTGGCAGACCAGCTTACCAGCCAGGTGCAAGCTTTTAGAAGTTTGGAATTCTATATTTGCTACTATTTCTGGGGAAACTTCAAGACCAGATCAAACAAGTGCCTCGAAAGTGATGTTTATAAAACATTTTATTTAGTTGTAGCTATTATTCCATTCTGGATCCGTTGTCTCCAGTGCCTTAGACGATTATTACTTGAAGAAAGAAATATAATGCACGGGCTCAATGGGCTAAAATATATCTCAACAATAGTAGCACTTGTCTTGAGGACTACTAATGAGTTTCAAAAAGGAACGGTTTTGAAGATTCTGGCTGCATCTTCTTCAGGCATTGCAACAATTGTTAATACATATTGGGATATTGTAATAGATTGGGGTTTGCTTAGGAGGAATTCAAGAAATCCATGGTTGAGAGATAAACTTTCTGTACCACACAAAAGTGTATATTTTGTTGCTATGGTGTTGAATGTTATACTACGACTTGCATGGATGCAATCTGTGTTGGGCATTAGGGAAGCTCCTTTCCTGCATAGAACAGCTTTGACTGCTCTTGTAGCTTGCTTAGAGATCCTTCGCCGTGGCATTTGGAATTTTTTCAGGTTGGAGAATGAGCACTTGAACAATGTTGGCAAGTATCGGGCATTCAAGTCAGTACCACTGCCTTTTAATTATCAAGATGAAGATGAAGAAGAATAG 2334 0.3925 MKFGKEFVSQMVPEWQEAYMDYNSLKAILKDMSRLRQRNESSAPMASTPKGSLKRRLTLYRAFSGLTGRQRGSPMNNEDEVILVRAEEGEGSEGLYQTMFLKPSEEGAERDVEFFKKLDHEFNKVNNFYKKMVKEVVEEADELSKQMNALIAFRIKVDKVGFRNLASNGTSTFATSMMHHTNDARPGHSRPRMDVIHEVEMSNGRHLDYGSGNHVEQTTSRTSTEGFRPASLEILDHVKINVTTPETPVSTIKGLFLSSKSDHSFSKQELKKAEEQISIALKEFYHKLRLLKSYSFLNLLAFSKIMKKYDKVTSRNASKDYLKMVDSSYVGSSEEVNRLMERVEHAFIKHFSNGNHRKGMNTLRPTAKRERHRITFLLGLFTGCSIALIVALVVLIHARKILNSEGRTTYMDNIFPLYSLFGFIVLHMIIYSANVYFWRHFKINYPFIFGFKQGTELGYREVFLLSSGLAVLSLAAVLSNLDMEMDQRTKSFSALTELVPLGLVIVLLLITFCPFNIIYKSSRFFLIQCAFHCICAPLYKVNFPDNFLADQLTSQVQAFRSLEFYICYYFWGNFKTRSNKCLESDVYKTFYLVVAIIPFWIRCLQCLRRLLLEERNIMHGLNGLKYISTIVALVLRTTNEFQKGTVLKILAASSSGIATIVNTYWDIVIDWGLLRRNSRNPWLRDKLSVPHKSVYFVAMVLNVILRLAWMQSVLGIREAPFLHRTALTALVACLEILRRGIWNFFRLENEHLNNVGKYRAFKSVPLPFNYQDEDEEE* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00646 777 ProSiteProfiles SPX domain profile. 1 323 IPR004331 -
Rops8g00646 777 Pfam EXS family 415 752 IPR004342 GO:0016020
Rops8g00646 777 Coils Coil 263 283 - -
Rops8g00646 777 Coils Coil 126 146 - -
Rops8g00646 777 CDD SPX_PHO1_like 2 319 IPR034092 -
Rops8g00646 777 Pfam SPX domain 1 325 IPR004331 -
Rops8g00646 777 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 1 773 - -
Rops8g00646 777 ProSiteProfiles EXS domain profile. 582 777 IPR004342 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00646 Rops-Chr8 12770198 12775808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00646 - - gmx:100795104 1320.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00646 8 12770198 12775808 Rops8g00646 8 12770198 12775808 ECH