Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00261 ATGAGTCAAGAGAAGATAATGCATTATCAAGTGGAGCCATGGAGCTACTACATGAGGGTTAGGAGCATGGAAGATCAAATGGAGAGAGTGGTGAGGCTGGCATCACAAAGTGCTGTGGTGATATTCAGTATCAGTAGCTGTTGCATGTGCCATGCAATGAAGAGGCTCTTCTGTGGCATGGGTGTTAATACAACTGTGCATGAGCTGGATCAAGATCCAAAAGGAAAAGAGATGGAGAGAGCATTGATGAGGCTGCTTGGAAATTCAAGTGCTGTTCCTGTAGTTTTCATTGGAGGCAAGCTAGTTGGATCCATGGATAGGGTTTTGGCTTTTCACATCAATGGCTCCCTTGTCCCACTTCTCAAAGAAGCTGGAGCTTTGTGGCTTTGA 390 0.4538 MSQEKIMHYQVEPWSYYMRVRSMEDQMERVVRLASQSAVVIFSISSCCMCHAMKRLFCGMGVNTTVHELDQDPKGKEMERALMRLLGNSSAVPVVFIGGKLVGSMDRVLAFHINGSLVPLLKEAGALWL* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00261 129 FunFam Glutaredoxin family protein 27 128 - -
Rops8g00261 129 PANTHER GLUTAREDOXIN 27 129 IPR011905 -
Rops8g00261 129 Gene3D Glutaredoxin 17 128 - -
Rops8g00261 129 ProSiteProfiles Glutaredoxin domain profile. 27 128 - -
Rops8g00261 129 SUPERFAMILY Thioredoxin-like 27 128 IPR036249 -
Rops8g00261 129 Pfam Glutaredoxin 39 102 IPR002109 -
Rops8g00261 129 NCBIfam glutaredoxin-like family 30 129 IPR011905 -
Rops8g00261 129 CDD GRX_GRXh_1_2_like 38 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00261 Rops-Chr8 5231093 5231482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00261 7 129 Miscellaneous Gene Families AT3G02000 56.204 3.75e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00261 K03676 - gmx:100818015 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00261 8 5231093 5231482 Rops8g00261 8 5231093 5231482 ECH