Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00015 ATGCCCAGAACAACATTTTACCGGATATACAAGAAGAAATCGACAGAGGGTTTTCAGTCACTGCCTTACTTAGTGGCATTGTTCAGTTCCATGCTTTGGTTGTACTATGCTTTACTCAAAAATGATGTTGTTCTCCTCATCACCACTAACTCATTTGGCTGTGTCATAGAGATCATTTACATCATCCTGTACATCATCTATGCACCCAGGGATGCTAGGAACTTAACTTTTAAGCTATTTTCGGCAATGAATGTGGGCTCCTTTGCTTTGATCCTCTTAGTCACACACTTTGCTGTGCATGGCTCCCTTCGTGTCCAAGTTCTTGGATGGATTTGTGTTTTCATTTCTGTTAGTGTCTTTGCAGCACCACTAAGTATCATGGCACAAGTTGTTCGGACAAAGAGTGTGGAGTTTATGCCCTTCAATTTGTCATTTACCCTCACATTGAGTGCCATAATGTGGTTTGGTTATGGTCTCTTTCTCAAGGACATGTGCATTGCTCTCCCAAATGTGTTGGGTTTTGGACTGGGGTTACTTCAGATGCTGCTCTATGCCATTTATAGGAATCGCAGTGAAAAGGTTATTACAAAGGAAAAGAAGCCACCCCTTGAGCCACTCAAGAACGTTGTTATAGAGTGCCCGTTAGGAGCTGGTGATGTGTTCCAGGTGGAGAAAAATGAACAAGGAAAGAAGAACAAAGAAGACAAAGAGGAGGAGAAGAAAAGTGAGGAACTTAACGCCTGCGCAGTCTAA 753 0.425 MPRTTFYRIYKKKSTEGFQSLPYLVALFSSMLWLYYALLKNDVVLLITTNSFGCVIEIIYIILYIIYAPRDARNLTFKLFSAMNVGSFALILLVTHFAVHGSLRVQVLGWICVFISVSVFAAPLSIMAQVVRTKSVEFMPFNLSFTLTLSAIMWFGYGLFLKDMCIALPNVLGFGLGLLQMLLYAIYRNRSEKVITKEKKPPLEPLKNVVIECPLGAGDVFQVEKNEQGKKNKEDKEEEKKSEELNACAV* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00015 250 FunFam Bidirectional sugar transporter SWEET 1 73 - -
Rops8g00015 250 FunFam Bidirectional sugar transporter SWEET 104 196 - -
Rops8g00015 250 Gene3D - 104 200 - -
Rops8g00015 250 Coils Coil 226 246 - -
Rops8g00015 250 PANTHER RAG1-ACTIVATING PROTEIN 1 2 234 IPR047664 -
Rops8g00015 250 Pfam Sugar efflux transporter for intercellular exchange 106 190 IPR004316 GO:0016020
Rops8g00015 250 Pfam Sugar efflux transporter for intercellular exchange 4 71 IPR004316 GO:0016020
Rops8g00015 250 Gene3D - 1 72 - -
Rops8g00015 250 MobiDBLite consensus disorder prediction 225 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00015 Rops-Chr8 459738 461044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00015 2 244 Miscellaneous Gene Families AT5G13170 58.167 1.10e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00015 K15382 - gmx:100800528 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00015 8 459738 461044 Rops8g00015 8 459738 461044 ECH