LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops8g00009	ATGATGAAGAGCTCTCTGAAAAAGTTGCGAGGTTTGGCACTCCACAATCACAATCACAATCACAATCACAAGCATGAGTCCAAGGCCATTCAGCCTCTGGGCCAGCGTGATGAGCTCTCTCAGGCAACAAAGGACATGCAAGACATGCGAGACTGCTATGATACCTTGCTTTCTGCCGCCGCGGCAACCGCCAGCAGTGCCTATGAATTCGCGGAGTCCTTGCGGGACATGGGCTCTTGTCTTCTAGAGAAAACAGCATTGAATGATCACGAAGAAGAAACTGGAAAAGTTCTCCTCATGCTCGGCAAAATCCAGTTCAAACTTCAGAAACTCATTGATAACTATCGTTCTCATATAATCCAGACAATTACCATCCCCTCCGAGTCTCTCTTGAATGAACTTCGAATTGTTGAGGAGATGAAGCGACAATGTGATGAAAAAAGAGATGTATATGAGTATATGGTAACTAGATATCGAGAAAGAGGTAAGTCTAAAGGTGGAAAAGGCGAAACTTTTTCGCTAAAGCAGTTGCAAACTGCTCGTGATGAATATGATGAGGAGGCTACATTGTTTGTTTTCCGATTGAAATCTCTGAAGCAAGGGCAATCGCGCAGTCTTTTAACACAGGCAGCACGTCACCATGCTGCTCAGTTATGTTTCTTCAAGAAAGCAGTCAAATCTCTCGAGACAGTTGAACCGCATGTAAAATCAGTAACTGAACAGCAACACATTGATTACCACTTCAGTGGTCTTGAAGAGGAGGATGGGGATGAAGGTGATGATGGAGATGAAGATGACGTAGGTTATGATGAGAACGATGATGGAGAACTAAGTTTTGACTATGGACAAAGTGAACAAGAGCGAGATGTTTCTACATCACGAAATTCGATGGAGCTGGACCAAGTGGAACTTACACTTCCCAGAGGATCAACAGCTGAAGCTGCTAAGGATAACTTAGATAAGCTTCAAAGAAATTTGTTTTCCTTTAGGGTTAGGGCAGGGAGCCAATCCGCCCCACTTTTTGCTGATAGTAAACCTGATTCTAGTGAAAAACTGAGACAGATGCGCCCATCTTTATCACGGAAATTCAGTTCATATGTGCTACCCACTCCAGTTGATGCAAAGAGTTCAATCTCTTCAGGGTCAAATAATCCAAAGCCTTCCAAAATGCAGACAAATCTAAATGAACCTACAAAGAATTTGTGGCACTCATCCCCATTGGAACAAAAGAAACATGAAAAAGATATTGGAGATGAGTTTTCTGGTCCTACCGCAAGAAATGCACAGTCTGTACTCAAGGAAAGTAACAGCAATACTGCCTCCTCGAGATTGCCACCACCTTTGGTAGATGGTCCTTTATCTGTAAATCATGATTATGTTTCTGCTTACTCTAAAAAGATTAAGAGACATGCCTTTTCTGGCCCATTGACAAGTAATCCTTGGACTACCAAACCTGTCTCAGGAGAAAGTGTTCAATTGTTCTCTGGACCTCTTTTGCCAACTCCAATCCCACAACCTCCATCATCATCTCCTAAAGTATCTCCTAAAGTATCTCCTAGTGCTTCTCCTACTATTGTGTCTTCACCTAAAATAAGTGAGCTTCATGAACTTCCAAGGCCTCCAACCAATTTCCCATCCAATTCAAGGCTTTTAGGTTTGGTTGGTTATTCAGGTCCATTGGTGTCCAGAGGTCAAAAGGTTTCTGCTGCAAATAATTCGGTTGTTTCAAGTGCAGCATCTCCACTGCCAATGCCACCCCAGGCCATGGCTCGTAGTTTCTCCATACCTTCTAGTGGTGCTAGAGTTGCAGCATTACATGGGTCAAGGGCACTAGAACCCTCTCATATATCATCTATGTCTGAGGATATTGCTTCTCCTCCTCTGACGCCGATAGCATTATCTAGTAGTCGGCCATCATCAGATGGCTGA	1929	0.4344	MMKSSLKKLRGLALHNHNHNHNHKHESKAIQPLGQRDELSQATKDMQDMRDCYDTLLSAAAATASSAYEFAESLRDMGSCLLEKTALNDHEEETGKVLLMLGKIQFKLQKLIDNYRSHIIQTITIPSESLLNELRIVEEMKRQCDEKRDVYEYMVTRYRERGKSKGGKGETFSLKQLQTARDEYDEEATLFVFRLKSLKQGQSRSLLTQAARHHAAQLCFFKKAVKSLETVEPHVKSVTEQQHIDYHFSGLEEEDGDEGDDGDEDDVGYDENDDGELSFDYGQSEQERDVSTSRNSMELDQVELTLPRGSTAEAAKDNLDKLQRNLFSFRVRAGSQSAPLFADSKPDSSEKLRQMRPSLSRKFSSYVLPTPVDAKSSISSGSNNPKPSKMQTNLNEPTKNLWHSSPLEQKKHEKDIGDEFSGPTARNAQSVLKESNSNTASSRLPPPLVDGPLSVNHDYVSAYSKKIKRHAFSGPLTSNPWTTKPVSGESVQLFSGPLLPTPIPQPPSSSPKVSPKVSPSASPTIVSSPKISELHELPRPPTNFPSNSRLLGLVGYSGPLVSRGQKVSAANNSVVSSAASPLPMPPQAMARSFSIPSSGARVAALHGSRALEPSHISSMSEDIASPPLTPIALSSSRPSSDG*	643

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	405	420	-	-
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	251	280	-	-
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	423	444	-	-
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	613	642	-	-
	Rops8g00009	642	CDD	BAR	35	234	-	-
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	371	451	-	-
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	514	529	-	-
	Rops8g00009	642	Gene3D	Arfaptin homology (AH) domain/BAR domain	35	255	IPR027267	-
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	495	546	-	-
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	250	311	-	-
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	371	404	-	-
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	499	513	-	-
	Rops8g00009	642	SUPERFAMILY	BAR/IMD domain-like	36	237	IPR027267	-
	Rops8g00009	642	FunFam	Hydroxyproline-rich glycoprotein family protein	34	249	-	-
	Rops8g00009	642	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	2	640	IPR037488	-
	Rops8g00009	642	Pfam	BAR domain of APPL family	37	242	IPR004148	GO:0005515\|GO:0005737
	Rops8g00009	642	MobiDBLite	consensus disorder prediction	284	300	-	-
	Rops8g00009	642	Coils	Coil	312	332	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops8g00009	Rops-Chr8	304525	309716	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops8g00009	-		-	gmx:100778278	983.4

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops8g00009	8	304525	309716	Rops8g00009	8	304525	309716	ECH