Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00008 ATGGAGACGAGCACGCTTTTTCATGTTCTTGCCATTTTTCTTCTCCTATCAGACCCTTTCGCTGTTGCAAATGCAAACTTTGAAGGTGATGCTCTGTACACGTTCAAAAGAGCTGTGAAAGACCCAAATAACGTTCTACAGAGTTGGGATCCCACTTTGGTGGATCCATGTACATGGTTTCATGTTACCTGTGATGACGATAAGCGGGTTACCCGACTAGACCTTGGACACGCAAAACTATCGGGCCAGTTGGTTCCGGAGCTAGGGAGGCTCCAGCGCCTTCAATTTCTAGAATTGTACAAGAATGAATTGGTGGGCCCAATACCAAAGGAACTTGGAGACCTCAAGAACCTGGTCAGTTTGGGTCTTTACCACAATAACCTCACTGGGTCCATCCCTTCCACCCTCTCTAACCTCTCCAACATCAAATTCTTGCGACTCAACGGCAACAAGCTGACAGGAAGAATACCAAGGGAGCTCACTAAACTAGGAAACCTCAAGATCCTAGACCTATCAAACAATGATCTGTGTGGTACCTTCCCCACATCCGGCTCCTTCTCCAAGTTCTCTGAAGAAAGTTTCAAGAACAATCCAAGACTTGAAGGACCAGAATTAATGGGATTCGTTCGATATGATATTGGAGGAAGCTGCAAATGA 657 0.4581 METSTLFHVLAIFLLLSDPFAVANANFEGDALYTFKRAVKDPNNVLQSWDPTLVDPCTWFHVTCDDDKRVTRLDLGHAKLSGQLVPELGRLQRLQFLELYKNELVGPIPKELGDLKNLVSLGLYHNNLTGSIPSTLSNLSNIKFLRLNGNKLTGRIPRELTKLGNLKILDLSNNDLCGTFPTSGSFSKFSEESFKNNPRLEGPELMGFVRYDIGGSCK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00008 218 Gene3D Ribonuclease Inhibitor 25 207 IPR032675 -
Rops8g00008 218 FunFam Somatic embryogenesis receptor kinase 1 24 210 - -
Rops8g00008 218 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Rops8g00008 218 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 190 - -
Rops8g00008 218 SUPERFAMILY L domain-like 28 189 - -
Rops8g00008 218 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00008 Rops-Chr8 301087 303351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00008 1 203 Receptor kinase-like Gene Family AT1G71830 57.843 6.77e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00008 - - gmx:100778819 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00008 8 301087 303351 Rops8g00008 8 301087 303351 ECH