Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01408 ATGTTAAACGACGCCGTTTGGTTCCTCATCGTCATCTTCCAATGCCTTCTCTCCGCCAAGGCTCAATCGTCGATCCTTCTTCAGAGTCAACTCAACCGTGACTCGCTGATATCATCTCCGGTGAGTTGCCCCGCGCCCGACCCCAACCTCTACTACCAGCCGGTCATCGGAATTGTCAGCCACCCCGGCGACGGCGCCTCCGGCCGCCTCAGTAACGCCACCGGCGCTTCCTACATCTCCGCCTCATACGTGAAATTCGTGGAGGCCGCCGGCGCCAGAGTTGTTCCACTCATCTATAACGAGTCACCGGAGAAGCTTCTCAAGAAGCTCAAATTGGTAAACGGAGTTCTCTTCACTGGTGGATGGGCCAAAGATGGTTTATATTTTGAAACTGTTGGGAGAATATTTAAGAAAGTTTTAGTGAAAAATGATGCCGGAGACCATTTCCCATTATATGCCATCTGTTTAGGTTTCGAACTTGTATCAATGATCATAAGCGAGGACGATAATATTCTTGAAGAATTTAGTGCATCAAATCAGGCAAGTACTCTTCAATTTGTGGAGAATACAAACATCGAAGGAACTGTATTTCAAAGATTTCCTCCCGACTTGTTAAAGAAGATGAGTACAGATTGTCTTGTCATGCAAAATCATCGTTATGGCATATCCCCAGGAAAGTTTCTGGATAATCAGAAGTTATCTAGTTTTTTTGAGATCTTGACAACTTGCAAGGATGAAGATGATAAGGTTTATGTTTCCACAGTGCATTCAAAAAACTATCCAGTGACTGCCTTCCAATGGCATCCAGAGAAAAACGCCTTTGAATGGGGCTCGCCAAGAATTCCACACACGGAGGATGCCATTCAGATAACTCAGTATGTTGCAAATTTTTTGGTCAGTGAAGCTAGGAAATCCTTAAACAGACCAGTTACTCAAGAATTGCTGGACAATCTCATTTACAATTACAGACCCACTTATTGTGGGACGGCTGGGATAGGATTTGATGAAGTTTATATATTTTCACAAGTCTAA 1032 0.4419 MLNDAVWFLIVIFQCLLSAKAQSSILLQSQLNRDSLISSPVSCPAPDPNLYYQPVIGIVSHPGDGASGRLSNATGASYISASYVKFVEAAGARVVPLIYNESPEKLLKKLKLVNGVLFTGGWAKDGLYFETVGRIFKKVLVKNDAGDHFPLYAICLGFELVSMIISEDDNILEEFSASNQASTLQFVENTNIEGTVFQRFPPDLLKKMSTDCLVMQNHRYGISPGKFLDNQKLSSFFEILTTCKDEDDKVYVSTVHSKNYPVTAFQWHPEKNAFEWGSPRIPHTEDAIQITQYVANFLVSEARKSLNRPVTQELLDNLIYNYRPTYCGTAGIGFDEVYIFSQV* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01408 343 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 45 341 IPR015527 GO:0008242
Rops7g01408 343 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 11 341 IPR015527 GO:0008242
Rops7g01408 343 SUPERFAMILY Class I glutamine amidotransferase-like 74 327 IPR029062 -
Rops7g01408 343 Gene3D - 52 341 IPR029062 -
Rops7g01408 343 FunFam Folate gamma-glutamyl hydrolase 50 341 - -
Rops7g01408 343 Pfam Peptidase C26 54 270 IPR011697 GO:0016787
Rops7g01408 343 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 69 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01408 Rops-Chr7 19663152 19673026 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01408 K01307 - gmx:100796947 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01408 7 19663152 19673026 Rops7g01408 7 19663152 19673026 ECH