Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01406 ATGGGTTGTGCTGGATCCTCACAATCCAAGGCTGATGGGGCAGTGAAAAAGATCCGAAAGCCTAAGCCTTGGAAGCACCCTCAGCCCATAACAAAGACTCAGCTAATACAATTGCGCGATGAGTTCTGGGACACATCTCCTCACTATGGTGGTCGAAAAGAGATTTGGGATGCTCTTCGAGCTGCTGCCGAGGCTGATCTAACTTTAGCTCAAGCAATTGTGGATAGTGCTGGGGTCATTGTCCAGAGTTCTGATTTGACAGTATGTTATGATGAAAGAGGAGCAAAATATGAGCTACCTAAGTACGTTTTGAGTGAGCCAACTAACCTGATCCGGGACGGTTAA 345 0.4696 MGCAGSSQSKADGAVKKIRKPKPWKHPQPITKTQLIQLRDEFWDTSPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDG* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01406 114 Pfam Ubiquitin-binding domain 16 113 IPR032752 -
Rops7g01406 114 Gene3D - 31 104 IPR038169 -
Rops7g01406 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 113 IPR039869 -
Rops7g01406 114 MobiDBLite consensus disorder prediction 1 27 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01406 - - gmx:100306399 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01406 7 19640798 19645641 Rops7g01406 7 19640798 19645641 ECH