Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01405 ATGAGAAGTTACTTTCTCTTGTATGCTCTCATTTTACTTGCTGCTACTTTCTCTCTCCACTTTCAAGTTCATGCTGCTCCTGCAGGGCCGTTGATTAAGCATCTGTCTTCACTTATCAAATGGACAAGGTCTGCCTCCAAGATTCCACACTCAGATGGGAATGTTCTTCAATTTGAGAATGGTTATGTAGTTGAGACTGTTGTGGAAGGAAACGAGATTGGGGTCATCCCTTACAGGATTCGTGTCTCTGAGGAGGATGGCGAACTCTTTGCTGTTGATTCAATTAATAGCAACATTGTTCGAATTACCCCGCCGTTGTCCCAATATAGTAGAGGAAGATTGGTAGCTGGGTCATTTCAAGGCTACACTGGTCATGTGGATGGAAAACCAAGTGATGCTCGTTTTAATCATCCCAAAGGCATAACCGTGGATGATAAAGGGAATGTTTATGTTGCTGATACTCAGAATCTGGCCATCAGAAAGATTGGAGATGCTGGTGTGACAACCATTGCTGGAGGAAAGTCTAATGTTGCAGGCTACAGGGATGGGCCTAGTGAGGATGCTAAGTTCTCAAATGATTTTGACGTGGTATATGTTCGACCCACGTGTTCCTTGTTGGTCATTGATAGAGGAAATGCTGCTCTTCGGCAAATCAATCTTGACCAGGAGGACTGTGATTATCAATCTAGTTCAATTTCCAGTACAGATATCCTCACAGTTGTTGGTGCTGTTGTGGTAGGATATGCTACATGCATGCTACAGCAGGGATTTGGATCCTCTTTCTTCTCAAAAACACGAACATCAGAAAGAGGGTTTAAAGGGCAAGCAAGCAATGAGAAGCACATGCCGATCCTGGAGAACAGTAAAGAGGAGCCAGGATGGCCATCTTTTGGACAGCTTATAGTTGATCTTTCTAAGTTCTCCCTTGAAGCATTGGCTAGTGCATTCACTCAATTCATACCCTCACATTTTCGGTCTGGCAGCTCCAAGAGAAACCTAACACCACTAAAAGATCATCTTATAATGCCTGAAGATGAAGTGGCGCCTCCATTGGTCAATAGGCAAAGCGTTCCTGCTCCTCTCACCAAAACTAGGCAGGTGCCACAGCTCCATACTCCAAGCACAGCTGAGAAATACTCAGAAACAAAGCCCACAAAGATAAAATCAAGCAGTTTCAAGGACCCATCTTTGTCAAGTAAGCACCGTTCATCAAAAAGACCTGAGTATGCTGAGTTCTATGGATCTACTGAGATCCCACCATACACTAAAGCTAAGAGCCAGAAAGAAAGACCAAGACATAGGCAACGTGAAAAGAGTGGAGAAGTTGCTTTTGGGGCAGTTGGAGCTGAGGCCAAACCTGTTGAGACAAGTGCTGTTGATCGTAGCAATCCAAAGTTTGATCATTACAGTATGAGGACTAAGTATGTATCTGGGGAGTCCTTCAGATTCAACTCTCAGTAG 1461 0.4401 MRSYFLLYALILLAATFSLHFQVHAAPAGPLIKHLSSLIKWTRSASKIPHSDGNVLQFENGYVVETVVEGNEIGVIPYRIRVSEEDGELFAVDSINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPKGITVDDKGNVYVADTQNLAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQINLDQEDCDYQSSSISSTDILTVVGAVVVGYATCMLQQGFGSSFFSKTRTSERGFKGQASNEKHMPILENSKEEPGWPSFGQLIVDLSKFSLEALASAFTQFIPSHFRSGSSKRNLTPLKDHLIMPEDEVAPPLVNRQSVPAPLTKTRQVPQLHTPSTAEKYSETKPTKIKSSSFKDPSLSSKHRSSKRPEYAEFYGSTEIPPYTKAKSQKERPRHRQREKSGEVAFGAVGAEAKPVETSAVDRSNPKFDHYSMRTKYVSGESFRFNSQ* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01405 486 MobiDBLite consensus disorder prediction 359 448 - -
Rops7g01405 486 Gene3D - 43 219 IPR011042 -
Rops7g01405 486 Pfam NHL repeat 135 161 IPR001258 GO:0005515
Rops7g01405 486 SUPERFAMILY NHL repeat 59 221 - -
Rops7g01405 486 PANTHER - 28 475 - -
Rops7g01405 486 MobiDBLite consensus disorder prediction 359 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01405 Rops-Chr7 19623164 19633900 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01405 - - gmx:100797841 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01405 7 19623164 19633900 Rops7g01405 7 19623164 19633900 ECH