Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01403 ATGCAGATGGAATCAGTGAAGCCATCAGCAGTGACCCCAAGTAAGAAGTTAGCTCGCAGTTTTGCTAAAGTTCTTCATCTTAGAGCACTGATTGGAATTGCATCAGTTGATGGGTTGAAGAATGTTATATCTGATGCAAATCTCAAGGATGAAGGAAACATGGATAAGACTTGGACTGAGTCTTTCAACAAAGATGATGATGAAGAGTTTCAAGAAAGAGTTGCCACTGAAGCTCTCCTTGCAAAGCTGTTTGCTAGCATTTCAACAGTTAAAGCTGCATATGCTCAACTACAGTATGCTCAGTCACCTTTTGACCCTGATGGAATTGAAGCTGCTGATCAATTGCTGGTGTCTGAGTTGAAGAACTTATCTGAGCTAAAGCAATGTTACTTGAAGAAACAGTTTGATCCTTCACCTGAGACAGCAATTCTTGCAGCTGAATCTAAGGAGCTGCAGGGTGTTACAAAAACCTATGAGATTATGGGGAAGAAGTTAGAATCACAGGTGAGGCTCAAGGATTCTGAGATTACGTTTCTTAGAGAGAAGTTAGAGGAAGTTAATAGGGAGAATAAGTCAATTGAAAAGAGATTAAACCAAAGTGGGCCATTATCTGTACTTGATAATCTTCATATATCAGGATTAAGTCCTAGCCATTTTATCACTGTTCTTCGCCACACGGTTAGGTCCATTAGAAACTTTGTGAGGTTGATTGTGGATGAGATGAGATCTGCAAGTTGGGATGTTGATGCTGCAGTTGATGCTATTGAACAGAATGTGGTTTACTTGATAGAAGATCACAAGTGTTTTACATTTGAGTCCTTTGTTTGCAAGGAGATGTTTGATGCGTTTCACTTCCCCAATTTCTCCCTTCCAAATGAGTCTCTTCCAGATAGAAACAAGAGACAACAGTGGTTCTTTGGTAGGTTCAATGAGCTGAAATCCATGAAAGCAAAGGACTTCCTTGCGGAGAAGCCAAGATCATCATTTGCAAAATTTTGCAGGATCAAGTACTTGAGACTTGTTCATCCTAAGATGGAGTCATCATTTTTTGGCAACCTGAGCCAAAGGAACCTTTTGAGTTCAGGAGAATTTCCAGATACTGCTTTCTTCACATCATTTGCTGAGATGGCTAAGAGGGTATACCTCCTACATTGCTTAGCCTTCTCTTTCGAGCCTCAAGCTTCAATCTTTCAAGTTAGGAAAGGGTGTAGATTCTCTGATGTGTACATGGAAAGTGTGAATGATGAGGTGTTCCTCTGTTCAGACCAGACAGTTGAATCAGATCCACAAGTTGCTTTCACTGTGGTTCCGGGTTTTAGGATTGGTAAAACTGTTATACAGTGCCAAGTTTACCTCTCACAGCACCAAACCAAGGTAAAACAGTTCACTTCCACAAAGCAAAGGTAG 1407 0.4065 MQMESVKPSAVTPSKKLARSFAKVLHLRALIGIASVDGLKNVISDANLKDEGNMDKTWTESFNKDDDEEFQERVATEALLAKLFASISTVKAAYAQLQYAQSPFDPDGIEAADQLLVSELKNLSELKQCYLKKQFDPSPETAILAAESKELQGVTKTYEIMGKKLESQVRLKDSEITFLREKLEEVNRENKSIEKRLNQSGPLSVLDNLHISGLSPSHFITVLRHTVRSIRNFVRLIVDEMRSASWDVDAAVDAIEQNVVYLIEDHKCFTFESFVCKEMFDAFHFPNFSLPNESLPDRNKRQQWFFGRFNELKSMKAKDFLAEKPRSSFAKFCRIKYLRLVHPKMESSFFGNLSQRNLLSSGEFPDTAFFTSFAEMAKRVYLLHCLAFSFEPQASIFQVRKGCRFSDVYMESVNDEVFLCSDQTVESDPQVAFTVVPGFRIGKTVIQCQVYLSQHQTKVKQFTSTKQR* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01403 468 Coils Coil 169 196 - -
Rops7g01403 468 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 14 453 IPR040225 GO:0009639|GO:0009959
Rops7g01403 468 Pfam Plant protein of unknown function (DUF641) 73 196 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01403 Rops-Chr7 19522116 19523522 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01403 - - gmx:100810236 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01403 7 19522116 19523522 Rops7g01403 7 19522116 19523522 ECH