Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01400 ATGGCCAAAGGAACAAGCTCAAAGATGAACATCGCTATAATTCACCCAGATCTTGGCATAGGTGGAGCTGAAAGATTAATTGTGGATGCAGCTGTTGAGCTTGCATCCCATGGTCATGAAGTTCATATTTTTACTGCACATCATGATAAAAATAGATGCTTTGAGGAAACTATTGCTGGTACATTTCCAGTTACCGTCTATGGTTCCTTTCTTCCTCGGCATATATTCTACCGTCTTCATGCGTTGTGTGCGTACCTTCGGTGCCTATTTGTTGCTATCTGTATGCTTTTCATGTGGCCATCATTTGATGTTATACTAGCAGATCAAGTATCTGTAGTTATTCCCATCTTGAAACTTAAAATGTCAACAAAGGTTGTATTCTACTGTCATTTTCCAGACTTGTTGCTGGCTCAACATTCAACTTTCATTAGAAGGATGTATAGGAAACCGATAGACTATGTAGAAGAAATAACAACTGGAATGGCTGATTTGATACTTGTTAACAGCAACTTCACTGCATCTACTTTTGCAAATACTTTTAAGCATCTAGATGCTAAAGGAATTCGACCAGCTGTTCTATACCCAGCAGTCAATGTGGAGCAATTCAATGAACCCAGTTCCTTTAAGCTGAATTTTCTTTCCATTAACCGCTTTGAAAGGAAGAAGAACATACAATTAGCAATTTCAGCTTTTGCTATGCTTCACTCACCCAAAGGAGTTCTTAAGAATCAAGATATTACCAACGCTTCTTTGACTATTGCAGGTGGCTTTGATAAACGGTTGAAGGAGAATGTGGAGTACTTAGAAGAGCTTAAAGATTTAGCTGAAAAGGAAGGGGTCTCTAATCAAATAAAGTTCATCACATCTTGCTCTACAGCTGAAAGGAATGCTCTTCTTTCAGAATGCCTATGTGTCCTTTACACACCAAAGGATGAGCACTTTGGCATTGTTCCTTTGGAGGCAATGGCAGCTTATAAACCTGTTATTGCATGCAATAGTGGTGGTCCTGTGGAGTCAATCAAGAATGGTGTAACAGGATTCCTTTGTGATCCTACACCACAAGAGTTTTCTTCAGCAATGGCTAACCTCGTAAATGATCCCCAGGAAGCAGAAAGAATGGGCGGAGAAGCTAGGAGGCATGTTGTTGAGTCATTCTCTACAAAGACATTTGGCCAACATTTAAATAGATATCTAGTCGACCTTCACAGGGGAAAGGAGGATTGA 1224 0.3987 MAKGTSSKMNIAIIHPDLGIGGAERLIVDAAVELASHGHEVHIFTAHHDKNRCFEETIAGTFPVTVYGSFLPRHIFYRLHALCAYLRCLFVAICMLFMWPSFDVILADQVSVVIPILKLKMSTKVVFYCHFPDLLLAQHSTFIRRMYRKPIDYVEEITTGMADLILVNSNFTASTFANTFKHLDAKGIRPAVLYPAVNVEQFNEPSSFKLNFLSINRFERKKNIQLAISAFAMLHSPKGVLKNQDITNASLTIAGGFDKRLKENVEYLEELKDLAEKEGVSNQIKFITSCSTAERNALLSECLCVLYTPKDEHFGIVPLEAMAAYKPVIACNSGGPVESIKNGVTGFLCDPTPQEFSSAMANLVNDPQEAERMGGEARRHVVESFSTKTFGQHLNRYLVDLHRGKED* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01400 407 Coils Coil 258 278 - -
Rops7g01400 407 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 6 204 - -
Rops7g01400 407 Pfam Glycosyltransferase Family 4 20 200 IPR028098 -
Rops7g01400 407 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 205 386 - -
Rops7g01400 407 Pfam Glycosyl transferases group 1 211 379 IPR001296 GO:0016757
Rops7g01400 407 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 397 - -
Rops7g01400 407 Gene3D Glycogen Phosphorylase B; 212 385 - -
Rops7g01400 407 Gene3D Glycogen Phosphorylase B; 5 211 - -
Rops7g01400 407 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 5 402 IPR027054 GO:0004378|GO:0006486
Rops7g01400 407 CDD GT4_ALG2-like 9 394 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01400 1 407 Glycosyltransferase AT1G78800 77.451 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01400 K03843 - gmx:100809168 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01400 7 19469947 19473954 Rops7g01400 7 19469947 19473954 ECH