Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01374 ATGGCCAACTTCCTCGCTCAGTTCCAAACAATTAAGGACTCCTCCGATCGCCTCGTCATCTCAGTGGAGGATGTGAGTGACTTGTGGCCAACTGTCAAGACTGCTTTTGAAGCACGATTGCCATTCAAAAGGGCATGTTTGAATAACAAGACACGGAACCCTGTCTTTGTCGAGACATTGCCGGCAGAGTTCATATTAACAACAGATTCAAGACTCCGAAGCCGGTTCCCTCAGGAGCAGTTGTTGTTCTGGTTTCGAGAGCCGTATGCAACTGTTGTGCTTGTCACCTGTGAGGATCTTGATGAGTTCAAAACCATCCTCAAACCCCGCCTGAAATTAATTGTCCAAAATGATGAAAGGGAATGGTTTATTGTATTTGTATCTAAAGCTCATCCCGCTAATGATCAGGCAAACAAAATGGCGAAGAAGGTATATGCTAAACTTGAAGTCGAGTTTAGCTCCAAAAAAAGAGAAAGATGCTGCAAATATGATATGCATTTCCCTGAAGCAAATTTTTGGGAAGATCTGGAATCAAAGATAACAGAATGCATCAGAAATACACTGGATAAGCGTGTACAGTTTTATGAGGATGAGATACGGAAGCTCAGTGAACAGCGCCTCATGCCAGTCTGGAACTTCTGTAATTTTTTCATTCTGAAGGAAAGCTTGGCTTTTATGTTTGAAATGGCTCACCTTTATGACGATGCCTTATGGGAATATGATGAACTAGAACTCTGCTATCTTGAAACAGTTAACATGACTGGAAAGCAAAGAGACTTTGGAGGGGTAGACCATGGTGATGATCAAGCAGCAATTCTTAATCCAGGAAACAAAGCATTGACACAGATTGTTCAAGAGGACTCGTTTAGGGAGTTTGAATTTAGACAGTATCTATTTGCCTGTCAATCAAAGCTCTTATTCAAGTTAAATCGTCCCATTGAGGTTGCATCACGAGGTTATTCATTCATAATAAGCTTCACAAAATCCTTGGCATTGCATGAGCGTATTCTGCCTTTTTGTATGCGTGAAGTCTGGGTGATAACTGCTTGCTTGGCTTTAGTTGAAGCAACCACTTCCCATTATAATGATGGACTTGTGGCACCTGACATAGAGAAGGAGTTCTTTCGTCTTTTGGGTGACCTATATTCTCTAGCTAGAGTTAAGTTCATGAGGCTTGCCTATTTAATTGGGTATGGATCGGATATAGAAAGAAGTCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTTTGGCCTTCAGTTCCTCCTGATGCATCAGCAGAAGTGCTTGAGAAAGAAAAGCGGATTCTCCAAACAACTCCTACAACCAAGCACTTTGGTATCCAGAGGAAACCCCTTCCTCTTGAACCTACTGTGCTTCTACGAGAGGCCAACAGGCGAAGGGCTTCACTTTCAGCTGGAAATGTGTCTGAAATGTTTGACAGTCGCCAGGGTCCAATGGAAGGATCAGGTTTTGATGCATCTGCAAAGATGTCACCACAAAAAGTACTTGCAAGTTCCATGTCACGCACTAATTCTTCACCTGGAAACTTCGATAGCTCAATTGACCGACCTATGAGGCTTGCTGAGATTTATATTGCTGCTGAGCATGCTTTGAAGCAGACAATTTCTAATCCACAACTGTTGAAATCATTATTGTCATCTGAGGAGTTTGAGCAAAAATATTTAGAGCTAACTAAAGGTGCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGATCGCTGCTGTTGCCTTTAAGCATGGACATTTTGATCAAGCTGCCAAGTCATATGAGAAGGTTTGTGCACTGTATGCGGGTGAAGGATGGCAGGACCTGTTGGCTGAGGTCCTTCCTAATTTAGCTGAATGTCAGAAGATACTTAATGATCAAGCAGGCTACCTACTATCCTGTGTGAGGTTACTTTCTCTTGAAGAAGGATTATTTTTGACCAAGGAGCGTCAAGCTTTTCAGTCGGAAGTGGTTCGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCACTTGATGTATCATCACTAATTACATTTTCTGGAAATCCTGGGCCTCCATTGGAGTTATGTGATAGGGATCCTGGTATCCTTTCTGTAACTGTTTGGAGTGGTTTTCCAGATGATATAACTCTTGATTCGATCAGTCTTACATTAATGGCAACATATAATGCTGATGAAGGTGTAAAGGCTTTGAAGAGTTCTACAGCTATTGTTTTACACCCTGGTCAGAATACTATTACCTTAGATTTGCCACCTCAGAAACCAGGTTCATATGTTCTTGGAGTTATTACTGGGCACATTGGGCAGCTGAGGTTTAGATCTCATAGTTTTTCAAAAGTTGGTCCTGCAGATAGTGATGATTTTATGAGTTATGAAAAGCCAGCTAAACCCATCTTGAAGGTTTTCAAGCCTAGAGCCCTTGTTGATCTTGATGCTGCTGTTTCATCGGCTTTGTTAATAAATGAACACCAATGGGTTGGCATTTTAGTTCGACCATTAAATTACTCCCTCAAAGCTGCTGTCTTGCATATTGATACTGGCCCAGGGTTGGAGATTGAAAAGTCACACATAATTGAGATGGAAAGCTATGCTGGTGTATCAGAGAATAATGATGATCACGCACAGAAGGATGGTGCTCAAATAGATTCTTTGAATTCTGAGAAAAAATTTGAACGCTTGACTCTTTGTGATGGTAAAATAGAGTTTCCGAATTGGGCAAGTGACACTTCTTCCATTCTTTGGGTTCTGGTTCGTGCCATCAGTGACACGCTCAGCAGAGGATCATCTTCAGTCACAACAAGGAGAGAGAGTATTGTAGATGGAATGAGAACAATAGCTCTGAAACTTGAATTTGGAGCATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTTCATTTTACATATCCTTTCTATGTGAGAACAAGTGTTACTGATAAATGCAATGATGGTACCCTGCTTCTGCAGGTAATACTTCACTCTGAAGTAAAGGCTACATTGACCATATATGACGCTTGGCTTGATCTTCAAGATGGATTTGTTCATACAGGACAAACTGAGGGTAGACCTAATTCAAGCTTCTTCCCACTAATCATATCTCCCACTTCCAAAGCAGGAATTTTATTTAGTATCTGCGTAGGCAAGACAAATGCAGAAGAAGAAGCCAGGAAGCAACCAGAAAGCATATTAAATATCAAATATGGAATTTCTGGTGATAGAACAATTGGAGCCCATCCTCCTTTCATGAATGAATCTGCTGGAGTTGATGGTGCCAGACAGGAGTTGATCTTCAAGAGTGCAATTACATTGCAAAGGCCTGTGCTTGATCCATGTCTAGCCGTTGGTTTTCTTCCTCTCCCTTCAGATGGCCTAAGAGTTGGACAACTAGTTAAAATGCAATGGAGAGTGGAAAGGTTAAAGGATATGGATAAGAAAGAAGCTTCTGAGCAGAATGATGAGGTGCTATATGAGGTAAATGCAAATTCTGGAAATTGGATGATAGCTGGGAGGAAAAGAGGACATGTATCTCTCTCCACAAAACAAGGTGCAAGAATAATTATCTCAGTATTATGCATGCCACTGGTGGCTGGTTATGTTCGTCCTCCTCTACTTGGGCTGCCAGATGTTGATAAGGCAAATATAAGGTGCAAACCTGCTGGGCCACACCTGGTTTGTGTTTTGCCCCCAGTTCTCAGCTCATCCTTCTGCATTCCAGTTAATTCATGA 3777 0.4194 MANFLAQFQTIKDSSDRLVISVEDVSDLWPTVKTAFEARLPFKRACLNNKTRNPVFVETLPAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDEREWFIVFVSKAHPANDQANKMAKKVYAKLEVEFSSKKRERCCKYDMHFPEANFWEDLESKITECIRNTLDKRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLYDDALWEYDELELCYLETVNMTGKQRDFGGVDHGDDQAAILNPGNKALTQIVQEDSFREFEFRQYLFACQSKLLFKLNRPIEVASRGYSFIISFTKSLALHERILPFCMREVWVITACLALVEATTSHYNDGLVAPDIEKEFFRLLGDLYSLARVKFMRLAYLIGYGSDIERSPVNSASLSLLPWPKPAVWPSVPPDASAEVLEKEKRILQTTPTTKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVSEMFDSRQGPMEGSGFDASAKMSPQKVLASSMSRTNSSPGNFDSSIDRPMRLAEIYIAAEHALKQTISNPQLLKSLLSSEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVAFKHGHFDQAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYLLSCVRLLSLEEGLFLTKERQAFQSEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVWSGFPDDITLDSISLTLMATYNADEGVKALKSSTAIVLHPGQNTITLDLPPQKPGSYVLGVITGHIGQLRFRSHSFSKVGPADSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINEHQWVGILVRPLNYSLKAAVLHIDTGPGLEIEKSHIIEMESYAGVSENNDDHAQKDGAQIDSLNSEKKFERLTLCDGKIEFPNWASDTSSILWVLVRAISDTLSRGSSSVTTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTYPFYVRTSVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQDGFVHTGQTEGRPNSSFFPLIISPTSKAGILFSICVGKTNAEEEARKQPESILNIKYGISGDRTIGAHPPFMNESAGVDGARQELIFKSAITLQRPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLKDMDKKEASEQNDEVLYEVNANSGNWMIAGRKRGHVSLSTKQGARIIISVLCMPLVAGYVRPPLLGLPDVDKANIRCKPAGPHLVCVLPPVLSSSFCIPVNS* 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01374 1258 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 8 1255 IPR045126 GO:0048193|GO:1990071
Rops7g01374 1258 Coils Coil 185 205 - -
Rops7g01374 1258 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1140 1217 IPR022233 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01374 K20307 - gmx:100787264 2313.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01374 7 18957413 18975684 Rops7g01374 7 18957413 18975684 ECH