Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01359 ATGAGCAAAGCCGTTGGGGACGAAGAAGAGGACGAACAAGAGTGTTTCTACGAGTCCCAAGACCGCTTGCTCTCTCTCTCTTCCTCTTGCTCATGTTCCAACTCCAACTCCGATACCGAACAAGACCAAGAAGAACAAAATCTCAATCCCAATTTTGCCCTCAACAGTTACGACATATGGATCTCCCAACCTTCTTCTGTTTCCGAACGCCGCAACCGCCTCCTCCAAACCATAGGCCTCTCCTCCGACCCTTCCCTCTCTCGCCGGAACCCTCACAACAATGCCACCGATGCCGATGACTCGTCCTTGTCTAACCGGAATTCCATGTTCCGATCCAAATCCGACAGCGCCGCCTCCACTTCTCGTCGCAACGACAATTCAAACATCCACAACAGTGCCTCCACGTCCTCTCTTCATAATTTAAATAACGGGAATTGCGCTTCCGGTAAGCCTCCTTCCGGGAAGAATTTCGGTCCGGCGGTTTCGGAATCCAGTGGAGTGGAGGGAGGGGAAGAGGGAAAGGAACAAGTGTGTACTATAAGAGATCTTGATAATGGAAAGGAGTTTGTGGTGAAGGAAATTAGGGAAGATGGTACTTGGGACAAGCTTAAGGAGGTTGGTACTGGAAGACAATTAACAATGGAGGAGTTCGAGATGACGGTGGGGCATTCGCCGATCGTGCAAGAATTGATGCGGAGGCAGAATGTGGAGGAGGCGAATGCTAAGGACAATGGGGATTCGAATGTGATAAATGGAGGAGAGATTTGTGGTGGTGGTGGTGGTTTGAAGGTGAAGAAGAAAGGAGGGGGTTGGTTGAAGAGTATTAAGAGTGTGGCGAGCTCAATGGCGGGTCATAAGGAGAGGAGGAGTAGTGATGAGAGGGATACTTCGTCGGAGAAGGGAGGAAGGAGGTCGAGTTCTGCCACTGATGATAGTCAAGATGCTACATTTCATGGACCTGAGAGAGTGAGGGTGAAGCAATATGGGAAATCTTGTAAAGAGCTAACTGCGATGTACAAGAGTCAGGAGATTCAGGCTCATAATGGATCTATTTGGAGTATTAAGTTTAGTTTGGATGGGAAGTATCTTGCAAGTGCTGGTGAGGATTGTGTAATTCATGTTTGGCAGGTTGTGGAATCTGAGAGGAAAGGGGAGTTGTTGATTGACAAACCAGAGGATGGGAATGTTAATATGTTGTTTCTTGTTAATGGGTCGCCGGAACCGACATTGTTGTCTCCTTTGTTGGATAACCATCCAGAGAGGAAGAGAAAGGGGAGGTCTTCCATTAGTAGGAAGTCTTTGACTTTGGACCAATTTGTGTTGCCTGAAACCGTGTTTGCACTATCTGAAAAACCCATTTGCTCCTTTCAAGGTCATCTCCATGATGTGCTTGATCTCTCCTGGTCAAAGTCCCAGCACTTGCTCTCATCTTCAATGGACAAAACAGTGCGGCTGTGGCATTTGTCTAGCAAGTCTTGTTTGAAAATTTTTTCACACAGTGACTATGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGCGGATCTCTCGATGCTAAGGTTCGCATATGGAGCATTCCTGATCGACAAGTTGTTGATTGGACTGATCTTCATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGTCAGGGTGCACTAGTTGGTTCATACAAGGGTAGCTGCCATTTATATAATACATCCGAAAATAAATTGCAACAGAAAAGTCGGATCAATTTGCTGAACAAGAAAAAGAAACCGCATCATAAGAAAATTACTGGTTTCCAGTTTGCCCCAGGAAGTTCGTCAGAAGTACTTATCACATCTGCTGATTCACGAATTCGGGTTGTTGATGGTGTTGATCTGGTTCATAAGTTTAAAGGCTTTCGAAATGCAACTAGTCAGATTTCAGCCTCCCTCACAGCAAATGGTAAATATATTGTCGCAGCAAGCGAGGATTCCCATGTATACATCTGGAAAAATGAAGCTGATTGCAGGCCAAACAGAAGTAAAGGTGTCACTGTCACGCGCTCATATGAACATTTTCACTGTAAAGATGTATCAATGGCCATTCCCTGGCCTGGCATGGGTGATGCATGGGACATGCATGATGCATTTTCTGGAGAACAACCTGAGCTTGATAACAATGCTGATGAAGTCGCATCAGCCAATCATCCTCCTACCCCTGTGGAGGAAAACTTTGGTTCCGAGGGCTCACAATCTGCTTCAGGTTACCATAATAGTCCACATCATGCAACCATTGCAAGCACGACGAACAGTTACTTTTTTGATAGAATTTCTGCAACATGGCCAGAGGAAAAACTTCTTCTAGCTGCAAGAAATCAAAGCCCTCGTGTCAGTGCTGATTTCTCTATTGGGGTAAGTCAAAAAATGTCAGCTTGGGGTATGGTGATTGTAACTGCTGGCCTTCGAGGAGAAATTAGAACTTTCCAAAATTTTGGATTACCACTTCGGATATAA 2493 0.4537 MSKAVGDEEEDEQECFYESQDRLLSLSSSCSCSNSNSDTEQDQEEQNLNPNFALNSYDIWISQPSSVSERRNRLLQTIGLSSDPSLSRRNPHNNATDADDSSLSNRNSMFRSKSDSAASTSRRNDNSNIHNSASTSSLHNLNNGNCASGKPPSGKNFGPAVSESSGVEGGEEGKEQVCTIRDLDNGKEFVVKEIREDGTWDKLKEVGTGRQLTMEEFEMTVGHSPIVQELMRRQNVEEANAKDNGDSNVINGGEICGGGGGLKVKKKGGGWLKSIKSVASSMAGHKERRSSDERDTSSEKGGRRSSSATDDSQDATFHGPERVRVKQYGKSCKELTAMYKSQEIQAHNGSIWSIKFSLDGKYLASAGEDCVIHVWQVVESERKGELLIDKPEDGNVNMLFLVNGSPEPTLLSPLLDNHPERKRKGRSSISRKSLTLDQFVLPETVFALSEKPICSFQGHLHDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWTDLHEMVTAACYTPDGQGALVGSYKGSCHLYNTSENKLQQKSRINLLNKKKKPHHKKITGFQFAPGSSSEVLITSADSRIRVVDGVDLVHKFKGFRNATSQISASLTANGKYIVAASEDSHVYIWKNEADCRPNRSKGVTVTRSYEHFHCKDVSMAIPWPGMGDAWDMHDAFSGEQPELDNNADEVASANHPPTPVEENFGSEGSQSASGYHNSPHHATIASTTNSYFFDRISATWPEEKLLLAARNQSPRVSADFSIGVSQKMSAWGMVIVTAGLRGEIRTFQNFGLPLRI* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01359 830 Gene3D - 435 688 IPR015943 GO:0005515
Rops7g01359 830 MobiDBLite consensus disorder prediction 78 176 - -
Rops7g01359 830 Gene3D - 318 405 IPR015943 GO:0005515
Rops7g01359 830 MobiDBLite consensus disorder prediction 279 323 - -
Rops7g01359 830 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 456 490 - -
Rops7g01359 830 SMART WD40_4 449 487 IPR001680 GO:0005515
Rops7g01359 830 SMART WD40_4 532 570 IPR001680 GO:0005515
Rops7g01359 830 SMART WD40_4 623 664 IPR001680 GO:0005515
Rops7g01359 830 SMART WD40_4 578 622 IPR001680 GO:0005515
Rops7g01359 830 SMART WD40_4 490 529 IPR001680 GO:0005515
Rops7g01359 830 SMART WD40_4 337 376 IPR001680 GO:0005515
Rops7g01359 830 ProSiteProfiles Trp-Asp (WD) repeats profile. 456 496 IPR001680 GO:0005515
Rops7g01359 830 Pfam WD domain, G-beta repeat 343 375 IPR001680 GO:0005515
Rops7g01359 830 Pfam WD domain, G-beta repeat 451 486 IPR001680 GO:0005515
Rops7g01359 830 Pfam WD domain, G-beta repeat 492 529 IPR001680 GO:0005515
Rops7g01359 830 Pfam WD domain, G-beta repeat 627 664 IPR001680 GO:0005515
Rops7g01359 830 ProSiteProfiles Trp-Asp (WD) repeats profile. 344 385 IPR001680 GO:0005515
Rops7g01359 830 MobiDBLite consensus disorder prediction 709 754 - -
Rops7g01359 830 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 344 377 - -
Rops7g01359 830 PRINTS G protein beta WD-40 repeat signature 474 488 IPR020472 -
Rops7g01359 830 PRINTS G protein beta WD-40 repeat signature 363 377 IPR020472 -
Rops7g01359 830 PRINTS G protein beta WD-40 repeat signature 516 530 IPR020472 -
Rops7g01359 830 PANTHER WD REPEAT DOMAIN 44 7 827 IPR040324 -
Rops7g01359 830 MobiDBLite consensus disorder prediction 78 150 - -
Rops7g01359 830 MobiDBLite consensus disorder prediction 282 307 - -
Rops7g01359 830 MobiDBLite consensus disorder prediction 28 50 - -
Rops7g01359 830 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 496 530 - -
Rops7g01359 830 ProSiteProfiles Trp-Asp (WD) repeats profile. 496 530 IPR001680 GO:0005515
Rops7g01359 830 FunFam Transducin/WD40 repeat-like superfamily protein 302 405 - -
Rops7g01359 830 FunFam WD repeat-containing protein 44 437 703 - -
Rops7g01359 830 MobiDBLite consensus disorder prediction 737 754 - -
Rops7g01359 830 SUPERFAMILY WD40 repeat-like 339 666 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01359 Rops-Chr7 18633557 18639647 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01359 K20241 - gmx:100815065 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01359 7 18633557 18639647 Rops7g01359 7 18633557 18639647 ECH