Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01357 ATGGCCGATCGCTTCTTTCCGAACGAGATGCCACACTTCGTGGCAGAGACCACACTTGAAGATTCTCAAACAACAACAACAACAACAACACAAGATTCTCTCACCTCCCTCATTTCTCTTCCTTACCAAACACTCTCCTCAAAGTTCCAAGCTTCAGCATTTCACTTGAAACAAACGGTGGTGAAGGAGACATGGGGTTCGAGTGGGAAGCGTGTGAAGGACTATACTTTATACACTGGGGCTCTTGGGACAGCATACTTGGTTTTCAAGGCCTACCAAGTAACCAAGAATGGGAATGATCTTAATTTATGCTCAGAGATTGTTAAGGCTTGTGATTCTGCTTCAGCAAATTCTGGCCGTGTGACGTTTATCTATGGGCGTGCTGGTGTTTGTGCTCTTGGTGCTGTCATAGCCAAGCATACTGGTGATGATAGACTACTTCACTATTACCTAAGGCAATTCAAAGAGATTGGGATGCCTTGTGATACGTCCTATGAGCTATTGTATGGCAGTGCAGGTTACTTATGGGCTTGTTCATTCTTAAACAAGCATATTGGTAAAGACACAATACCTACTACCCACATGAGATCAGTTGTGGATGAAGTTATTGCAGCTGGTAGACAATTGGCTCACAAGGGAAGATGTCCTTTGATGTATGAATGGCATGGGAAGAAATACTGGGGTGCTGCTCATGGACTAGCAGGAATTATGCATGTTTTGATGGACATGGAACTCAAGCCAGATGAGGTGGAAGATGTCAAGGGTACGCTACGTTACATGATTAAGAATCGTTTCCCTAGTGGCAATTATCCCTCCAGTGAAGGAAGTGAATCTGATCGTCTTGTCCATTGGTGTCATGGTGCTCCTGGAGTCACTCTTACACTTGTAAAAGCGGCTGAGGTTTTTGGGGATAAGGAATTTCTGCAAGCAGCTGAAGATGCAGGTGAAGTAGTATGGAAGAGGGGTCTGCTAAAGCGAGTTGGAATGTGTCATGGCATCAGTGGGAACACCTATGTCTTTCTTTCTCTATACAGATTGACAGGAAATGTGGAGTACTTGTACAAGGCTAAAGCATTTGCTTGCTTTCTACTTGATAGAGCACAGAAATTGATCTCAGAAGGAAAGATGCATGGAGGAGATCGCCCTTATTCCTTATTTGAAGGTCTTGGAGGAATGGCATATACCTTTCTAGACATGATTGATCCACATGGGGCAAAGTTCCCAGGGTATGAACTTTGA 1239 0.4407 MADRFFPNEMPHFVAETTLEDSQTTTTTTTQDSLTSLISLPYQTLSSKFQASAFHLKQTVVKETWGSSGKRVKDYTLYTGALGTAYLVFKAYQVTKNGNDLNLCSEIVKACDSASANSGRVTFIYGRAGVCALGAVIAKHTGDDRLLHYYLRQFKEIGMPCDTSYELLYGSAGYLWACSFLNKHIGKDTIPTTHMRSVVDEVIAAGRQLAHKGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLRYMIKNRFPSGNYPSSEGSESDRLVHWCHGAPGVTLTLVKAAEVFGDKEFLQAAEDAGEVVWKRGLLKRVGMCHGISGNTYVFLSLYRLTGNVEYLYKAKAFACFLLDRAQKLISEGKMHGGDRPYSLFEGLGGMAYTFLDMIDPHGAKFPGYEL* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01357 412 PRINTS LanC-like protein superfamily signature 226 242 IPR007822 GO:0031179
Rops7g01357 412 PRINTS LanC-like protein superfamily signature 327 340 IPR007822 GO:0031179
Rops7g01357 412 PRINTS LanC-like protein superfamily signature 74 92 IPR007822 GO:0031179
Rops7g01357 412 PRINTS LanC-like protein superfamily signature 382 399 IPR007822 GO:0031179
Rops7g01357 412 PRINTS LanC-like protein superfamily signature 281 301 IPR007822 GO:0031179
Rops7g01357 412 PRINTS LanC-like protein superfamily signature 165 180 IPR007822 GO:0031179
Rops7g01357 412 SUPERFAMILY LanC-like 71 412 - -
Rops7g01357 412 PANTHER LANC-LIKE PROTEIN 1 412 - -
Rops7g01357 412 Gene3D - 1 412 IPR012341 GO:0005975
Rops7g01357 412 CDD euk_LANCL 77 408 - -
Rops7g01357 412 Pfam Lanthionine synthetase C-like protein 72 412 IPR007822 GO:0031179
Rops7g01357 412 FunFam LanC-like protein 2 1 412 - -
Rops7g01357 412 PRINTS Eukaryotic LanC-like protein family signature 298 319 IPR020464 -
Rops7g01357 412 PRINTS Eukaryotic LanC-like protein family signature 215 227 IPR020464 -
Rops7g01357 412 PRINTS Eukaryotic LanC-like protein family signature 343 361 IPR020464 -
Rops7g01357 412 PRINTS Eukaryotic LanC-like protein family signature 261 276 IPR020464 -
Rops7g01357 412 PRINTS Eukaryotic LanC-like protein family signature 2 15 IPR020464 -
Rops7g01357 412 SMART LANC_like_2 71 412 IPR007822 GO:0031179
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01357 Rops-Chr7 18624040 18626707 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01357 - - gmx:100786158 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01357 7 18624040 18626707 Rops7g01357 7 18624040 18626707 ECH