Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01350 ATGGGAGGTCGACGTTCGAAGCGTGTAGAGGACGAACAAGAAGGTGGTGTGGCGGCCAGAGAGACGAAGGAAAGGTGGAAGGCGGAGAGGGGAAAAAAGAGGCTCAGTGCAATGGACCTTGTTTGTTTGGAATTGACCTCCAAAACTTTTGGTGGTAGTCATGACTTGTTGTACCCTTTCAAGTTTAAGTCTTTAATAGACTTTGCTGCATTTCAATTGTGTGCTTCCCATGCTATCTATTCTAGGATGAGTTTGAATTCTCAGAGGGAGTTATATGATCGATGTGGTGGAAATTGGAAACGAGTTTTGAGGTTCTTGCAGTCTGTGGAACAATCCTCTGAGATGGTTGAGACATCATCAGGCAATATGCAAATTACAACTGGAAAGTATCACACCTTGCTGATTAGCAATTCCTCTGTCTACTCTTGTGGTTCTGGTTTGTGTGGCGTACTTGGTCAAGGGCCTGAAACAACACAGTGTGTAGCATTTACCCAGATTAATTTCCCACCTTTGGCACGTGTGGTTCATGTTTCAGCCTCCTATAACCATGCAGCTTTCGTTATGCAATCCGGAGAGGTATTCACATGTGGAGATAATTCATCTTCTTGCTGTGGGCATAGCGATACAAGCCGGCCAATTTTCAGGCCACGTCTTGTTGAATCCCTGAAGGGGATTCCTTGCAAGCAGGTTGCAGCAGGGCTTAACTTCACAGTCTTCCTCAGTAGACAAGGTCATGTTTATACATGTGGAACCAACACACATGGCCAACTTGGTCATGGTGACACTCAGGACAGACCAACTCCCAAAATGATTGAAGTCCTTGGTAATGTTGGTTCTGTTGTTCAGATTGCAGCTGGACCAAGCTATATCTTATCTGTAACGGAAGATGGTGCAGTATACTCCTTTGGATCAGGTGCTAATTTCTGTCTTGGCCATGGTGAGCAACACGATGAGTTTCAGCCACGTGCTATACAGAAATTTAAAAGAAAAGGTATCCATGTTGTCCGTGTATCTGCTGGGGATGAGCATGCAGTGGCACTTGATTCAAATGGATTTGTATATACATGGGGCAAGGGATACTGTGGTGCTTTAGGTCACGGAGATGAGATTGAGAAGACAACACCAGAGATCTTGACTAGTCTTAAGAGTCACTTGGCTGTTCAGGTCTGTGCAAGAAAGAGGAAAACCTTTGTTCTAGTTGACTCTGGTTCGGTCTATGGCTTTGGCTCCATGGGATTTGGTAGCCTCGGATTTTTGGATAGAATCTTGAAACCTCGAATGTTAGATACATTGAGAGCACACCATGTTTCTCAAATTAGCACTGGCTTGTACCACACTGTGGCAATCACTAGCCGTGGACAAATATTTGGCTTTGGAGACAATGAAAGAGCTCAGCTTGGTCATGACACATTAAGAGGATGCCTTGAACCCACTGAAATTTTCATAAAAGATACATCAGAAGATGTAGATCCTATTTTACAAAGCATCTGA 1491 0.4413 MGGRRSKRVEDEQEGGVAARETKERWKAERGKKRLSAMDLVCLELTSKTFGGSHDLLYPFKFKSLIDFAAFQLCASHAIYSRMSLNSQRELYDRCGGNWKRVLRFLQSVEQSSEMVETSSGNMQITTGKYHTLLISNSSVYSCGSGLCGVLGQGPETTQCVAFTQINFPPLARVVHVSASYNHAAFVMQSGEVFTCGDNSSSCCGHSDTSRPIFRPRLVESLKGIPCKQVAAGLNFTVFLSRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLGNVGSVVQIAAGPSYILSVTEDGAVYSFGSGANFCLGHGEQHDEFQPRAIQKFKRKGIHVVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPEILTSLKSHLAVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRILKPRMLDTLRAHHVSQISTGLYHTVAITSRGQIFGFGDNERAQLGHDTLRGCLEPTEIFIKDTSEDVDPILQSI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01350 496 Gene3D - 296 490 IPR009091 -
Rops7g01350 496 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 191 243 IPR000408 -
Rops7g01350 496 SUPERFAMILY RCC1/BLIP-II 116 418 IPR009091 -
Rops7g01350 496 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 244 296 IPR000408 -
Rops7g01350 496 Gene3D - 74 295 IPR009091 -
Rops7g01350 496 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 337 347 IPR000408 -
Rops7g01350 496 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 297 350 IPR000408 -
Rops7g01350 496 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 171 480 - -
Rops7g01350 496 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 351 402 IPR000408 -
Rops7g01350 496 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 439 449 IPR000408 -
Rops7g01350 496 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 403 452 IPR000408 -
Rops7g01350 496 PRINTS Chromosome condensation regulator RCC1 signature 448 469 IPR000408 -
Rops7g01350 496 PRINTS Chromosome condensation regulator RCC1 signature 139 155 IPR000408 -
Rops7g01350 496 PRINTS Chromosome condensation regulator RCC1 signature 283 299 IPR000408 -
Rops7g01350 496 PRINTS Chromosome condensation regulator RCC1 signature 193 209 IPR000408 -
Rops7g01350 496 PRINTS Chromosome condensation regulator RCC1 signature 299 313 IPR000408 -
Rops7g01350 496 PRINTS Chromosome condensation regulator RCC1 signature 392 410 IPR000408 -
Rops7g01350 496 Pfam Regulator of chromosome condensation (RCC1) repeat 436 464 - -
Rops7g01350 496 MobiDBLite consensus disorder prediction 1 25 - -
Rops7g01350 496 Pfam Regulator of chromosome condensation (RCC1) repeat 190 240 IPR000408 -
Rops7g01350 496 Pfam Regulator of chromosome condensation (RCC1) repeat 244 287 IPR000408 -
Rops7g01350 496 Pfam Regulator of chromosome condensation (RCC1) repeat 296 347 IPR000408 -
Rops7g01350 496 Pfam Regulator of chromosome condensation (RCC1) repeat 350 391 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01350 Rops-Chr7 18507982 18515915 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01350 - - gmx:100782653 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01350 7 18507982 18515915 Rops7g01350 7 18507982 18515915 ECH