Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01288 ATGAGGAACCCAACTGAGTCTAGTGCTTCCTCTCTGAAATCACCTGAGGTTGAGAATGATAGTGATTTTAGAGTTCATGTGTTCTCTTCAGCATCTGAGTTACTTGAAAAGCTTCATCAAACATGGAGTTCAGTGGAGAAACAACCATACCCAGCTATGTATTCTAGTATATATGGAGGTATCATACTTGATCCAGCAATGATGGTGATCCCCATTGATGATCACATGGTGCATAGAGGACATGGTGTGTTTGATACGGCTATTATTTTAGATGGATACCTCTATGAGTTGGATGTTCACCTTGACCGTTTCCTAAGATCAGCCTCCAAAGCAAAGATATCCTCTCCCTTTTCTAAGTCAACTCTTCACAGCATTCTAGTGCAACTAACTGCAGTATCAAAATGCAAGAAAGGAACTCTAAGATACTGGATGAGTGCAGGTCCTGGTGATTTCTTGCTATCATCAGCAGGATGTCCAACATCTGCATTCTATGCAGTAGTCATTGACCAAGATTTTTCCCAGTGCAAAGAGGGGGTTAAAGTGATTACTTCCAATATACCAATGAAGCCACCTCTATTTGCCACAGTGAAAAATGTGAATTATCTTCCAAATGTCCTTTCAATATTGGAAGCTGAAGAGAAAGGAGCATTTGCTTCTATTTGGGTTGATGAGGCTGGCTATATTGCTGAAGGTCCAAATGTGAATGTTGCTTTTATAACTCAAGAAAAGGAACTTGTCATGCCTCTTTTTGATAATATCCTACATGGTTGCACTGCAAAAAGGCTTCTGGAACTGGCACCGAAGTTGGTTGATCAAGGGCTTCTGAAAGGTGTAACAACTAAAAAACTGACTCTGGAGGAAGCTAAAGCTGCTGCTGAAATGATGTACGTAGGAAGCACACTTCCTGTGTTGCCTATCATTGTTTGGGATGATCAACCCATTGGTGATGGAAGAGTTGGAGAATTAACAATGTTACTTTCGGATTTGCTATGGAATGACATGGTAGCTGGCCCTGACACACAGAGAATACTTGTTCCTTACGTTGAGTGA 1050 0.4105 MRNPTESSASSLKSPEVENDSDFRVHVFSSASELLEKLHQTWSSVEKQPYPAMYSSIYGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILDGYLYELDVHLDRFLRSASKAKISSPFSKSTLHSILVQLTAVSKCKKGTLRYWMSAGPGDFLLSSAGCPTSAFYAVVIDQDFSQCKEGVKVITSNIPMKPPLFATVKNVNYLPNVLSILEAEEKGAFASIWVDEAGYIAEGPNVNVAFITQEKELVMPLFDNILHGCTAKRLLELAPKLVDQGLLKGVTTKKLTLEEAKAAAEMMYVGSTLPVLPIIVWDDQPIGDGRVGELTMLLSDLLWNDMVAGPDTQRILVPYVE* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01288 349 FunFam D-amino-acid transaminase, chloroplastic 30 168 - -
Rops7g01288 349 CDD ADCL_like 74 330 IPR017824 GO:0008696|GO:0030170|GO:0046656
Rops7g01288 349 Gene3D - 21 167 IPR043131 -
Rops7g01288 349 FunFam D-alanine aminotransferase 170 337 - -
Rops7g01288 349 Pfam Amino-transferase class IV 82 306 IPR001544 GO:0003824
Rops7g01288 349 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 57 334 IPR036038 GO:0003824
Rops7g01288 349 Gene3D - 168 342 IPR043132 -
Rops7g01288 349 PANTHER AMINO-ACID AMINOTRANSFERASE 24 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01288 Rops-Chr7 17474673 17478138 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01288 K18482 - gmx:100798871 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01288 7 17474673 17478138 Rops7g01288 7 17474673 17478138 ECH