Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01190 ATGCCTGAGGCTCCCACAATAGACCATGACCCCTCAGAGCAGAACAAGAAAACTCTTGAGTTCATAGAGGATGTTACTTCCAACGCTGACCAAGTCCAGAAAAAAGTCCTTGCTGAAATTCTCTCACACAATGCAAACGTCGAGTACTTGAAGAGACATGGTCTCAATGGTCACACAGACCCTGAGACCTTCAAGAAACTTGTGCCTGTCATAACCTATGACGATATCCAACCTGACATTAACCGCATAGCCAATGGTGACACTTCTCCAATCCTGACCTCAAACCCCATTTCAGAGTTTCTCACTAGCTCAGGGACATCTGGGGGTGAGAGAAAGTTGATGCCAGCAACTGAAGAGGAACTTGGGAGAAGGTATATGATGTATAGCCTGTTGATGCCTATAGTGAGCCAGTTTGTTCCAGACCTAGAAAAAGGAAAAGGAATGTACCTAATGTTTATTAAGAGTGAGTCTAAAACACCTGGGGGGATTGTGGCTCGTCCAGTTCTCACAAGCTATTACAAAAGCTCCTATTTTAGAGAGAGACCCTATGACCCATACACAAACTATACAAGCCCAAATGAGACTGTACTCTGTCCTGACTCATACCAAAGCATGTATTCCCAACTTCTTTGTGGTCTTTGCCAGAACAAAGAGGTGTTAAGGGTGGGGGCTATCTTTGCCTCTGGCTTCATTCGTGGCATCCATTTCCTTGAGAAACACTGGGCCCTCCTTTGCAATGATATAAGAACAGGAACCATCAACCCCTTAATCACTGACACATCAGTGAGAGATGCAGTGATGAAGGTCCTTAAACCTGATCCAAAGCTTGCTGATTTTATCCAAGATGAGTGTAGCAAGAGTTCCTGGCAGGGTATCATAACTAGGCTATGGCCCAATACAAAGTATGTTGATGTTATTGTGACTGGGACAATGTCACAGTACATCCCTACTTTGGATTACTATAGCAATGGCCTCCCTCTTGTCTGCACCATGTATGCTTCAAGTGAATGTTACTTTGGGGTCAACCTCGATCCCCTTTGCAAACCAAGCCAAGTGTCTTACACCCTCATCCCCACCATGTGCTACTATGAATTCTTACCCGTTAACAGAACCAATGAGGTCACTGGTTCCCTTCCAAGATCTCTCAATGAGGAAGAACAGCAAGAGTTGGTGGACCTTGTTGATGTCAAGCTTGGCCGAGAGTATGAGCTTGTTGTCACAACTTATGCCGGACTTTATAGGTACAGAGTTGGTGATGTGTTAAGGGTGGCTGGATTCAAGAACAAGGCCCCTCAATTTAACTTTGTTTGCAGAAAAAATGTTGTCTTGAGCATAGATTCTGACAAGACAGATGAAGTTGAGCTTCAGAATGCAATTAAGAATGCCGTGACACACTTGTTGCCATTTGATGCAGATGTGGTTGAGTACACTAGCTATGCAGATACAACAACAATCCCTGGACACTATGTGTTGTATTGGGAACTCAACCTTAAAGGGTCAACTCCTATTCCTCCATGTGTGTTTGAGGATTGTTGCTTAACCATTGAGGAATCACTCAACAGCGTTTATCGCCAAGGCCGTGTCTCAGACAAATCAATAGGGCCTCTTGAGATTAAAATTGTGGAGCAGGGGACATTTGACAAGCTCATGGACTATGCCATAAGCTTAGGGGCATCAATAAACCAGTACAAGACCCCAAGGTGTGTGAAGTTTGCTCCAGTTGTGGAACTATTGAACTCAAGGGTGATATCAAACTATTTCAGTCCAAAATGTCCAAAATGGGTTCCAGGTCACAAGCAGTGGATCAATCAGAATTAA 1818 0.4406 MPEAPTIDHDPSEQNKKTLEFIEDVTSNADQVQKKVLAEILSHNANVEYLKRHGLNGHTDPETFKKLVPVITYDDIQPDINRIANGDTSPILTSNPISEFLTSSGTSGGERKLMPATEEELGRRYMMYSLLMPIVSQFVPDLEKGKGMYLMFIKSESKTPGGIVARPVLTSYYKSSYFRERPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVLRVGAIFASGFIRGIHFLEKHWALLCNDIRTGTINPLITDTSVRDAVMKVLKPDPKLADFIQDECSKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLDPLCKPSQVSYTLIPTMCYYEFLPVNRTNEVTGSLPRSLNEEEQQELVDLVDVKLGREYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAIKNAVTHLLPFDADVVEYTSYADTTTIPGHYVLYWELNLKGSTPIPPCVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVISNYFSPKCPKWVPGHKQWINQN* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01190 605 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 15 591 IPR004993 -
Rops7g01190 605 Pfam GH3 auxin-responsive promoter 22 570 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01190 Rops-Chr7 15929661 15932206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01190 6 588 EF-hand Containing Proteins AT1G23160 50.338 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01190 K14487 - gmx:100791987 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01190 7 15929661 15932206 Rops7g01190 7 15929661 15932206 ECH