Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01165 ATGGCTAGTTCTAACAAGAAACTTGAGGTTCAAACAGAAGATCAAACTCCACATAAATGGTGTGTTTCATTGGGAGAAGAGGTTTTCAAAAGATTCTTCAGCCAGACTAATCCAACAGTGCATAAGGTTTTTGGTGATGGATCACTTTTTAGTCCAATGTTGTTTGGGAGGTTCTTTGATCCTTCTGATGCCTTCCCTCTATGGGAATTTGAGTCAGATATCTTGTTATCTCATCTAAGGAGTTCCAACCAAAGCACTGTGGATTGGCATCAGACAAATGAAGGCTATATATTAAAAGCAGAAATACCAGGAACTGGGAAAAATAACATTCAAGTCCATGTTGATAATGGGAAGGTTGTGGAAATTAGTGGACAGTGGAGGCAGCAAAGAGACTCAAAGGAAAATGACTGGAAGAGTGGAAATTGGTGGGAATATGGATATGTACGAAGGCTTGAGTTGCCAGAGGATGCAGATGGGAAGAACACAGAAGCATACTTATATAATGACATATTTTTAGAAATACGAATACCAAAGCAGGGTTGTGATCTTCATCAGGGAAAGGATGTGGCTTAA 573 0.3944 MASSNKKLEVQTEDQTPHKWCVSLGEEVFKRFFSQTNPTVHKVFGDGSLFSPMLFGRFFDPSDAFPLWEFESDILLSHLRSSNQSTVDWHQTNEGYILKAEIPGTGKNNIQVHVDNGKVVEISGQWRQQRDSKENDWKSGNWWEYGYVRRLELPEDADGKNTEAYLYNDIFLEIRIPKQGCDLHQGKDVA* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01165 190 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 78 190 IPR002068 -
Rops7g01165 190 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 3 182 - -
Rops7g01165 190 Gene3D - 26 189 IPR008978 -
Rops7g01165 190 SUPERFAMILY HSP20-like chaperones 52 179 IPR008978 -
Rops7g01165 190 Pfam Hsp20/alpha crystallin family 88 181 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01165 Rops-Chr7 15539855 15541420 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01165 - - gmx:100306244 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01165 7 15539855 15541420 Rops7g01165 7 15539855 15541420 ECH