Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01163 ATGGCTCCTCTTACAAACTTGCATGGAGTCTCCAAAACCTTAACTCCCATTACATGCCTTCAAAATGCACACAAGACTCTTAAGAGAGGACAAGTAGTTGGAATTCTTGGAAACAAAACACAGGACTTATCAGTTCAAACTACAAGAAGAGCAGCAACAATAGGCCTTGCCACTTTAGTCCTTACAGGGCAATTCAATGACAAGATTTCACTAGCTAAAGATAATGGATTCTGGATTGAAGGACCTATTCCAGAACCAACTGTCACTAACAATATTGCAAATGAGAAAACGGGAACTCGTTCTTTTATTAAGAAGAAACTCTACATGGCTAATATTGGAGTCAAAGGAAGTGTGTTAAGGATCAAGAAATATGCCTTTGATCTTTTGGCCATGGCAGATTTGATTGCACAAGACACACTCAACTATGTGAGGAGGTACCTGAGGCTCAAGTCTACCTTCATTTACTTTGATTTTGACAAGGTTATCTCTGCCACTCCTGGGGATGAAAAGCAACAACTAACTGATGTGGCTAACAAATTGTTTGATAATTTTGAAAAGCTTGAAGAAGCTTCAAGGAAGAAAAATCTAGCTGAAACAAAATCTTGCTATCAAGAAACTGAAGTTATGCTTAAAGATGTCATAGACCGGATGACTATAATATGTGCTTTGATTGCAAGTTGCAAGGACACAAAACCTACTAGTGCTACCTTATAG 714 0.3824 MAPLTNLHGVSKTLTPITCLQNAHKTLKRGQVVGILGNKTQDLSVQTTRRAATIGLATLVLTGQFNDKISLAKDNGFWIEGPIPEPTVTNNIANEKTGTRSFIKKKLYMANIGVKGSVLRIKKYAFDLLAMADLIAQDTLNYVRRYLRLKSTFIYFDFDKVISATPGDEKQQLTDVANKLFDNFEKLEEASRKKNLAETKSCYQETEVMLKDVIDRMTIICALIASCKDTKPTSATL* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01163 237 Gene3D - 80 218 IPR023222 -
Rops7g01163 237 FunFam Photosynthetic NDH subunit of lumenal location 3, chloroplastic 80 218 - -
Rops7g01163 237 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 32 217 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Rops7g01163 237 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 37 217 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Rops7g01163 237 Coils Coil 170 190 - -
Rops7g01163 237 SUPERFAMILY Oxygen-evolving enhancer protein 3, 108 217 IPR023222 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01163 K08901 - gmx:100814163 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01163 7 15524879 15526465 Rops7g01163 7 15524879 15526465 ECH