Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01155 ATGGAATCAATACTGGGTCGGGCTCTGGAGTACACTCTCAAATATTGGCTCAAATCCTTCTCCAGAGAACAGTTCAAGTTGCAAGGTCGAACCGTTCATCTCTCCAATTTAGATATCGACGGTGACGCGTTGCATTCCAGTGTTGGATTGCCGCCGGCTTTGAATGTTGCCACCGCCAAAGTTGGCAAACTCGAGATAACGCTTCCGTCGGTGAGTAATGTGCAAACGGAGCCGATTGTTGTCGAAATTGATACACTCGATCTGGTTCTCGAGGAGAATTCTGATCTTGATGCATCTCCAAGTGCAAACAGTTCCACACCGTCTGCTGCACCTGCCAAGGGTGGCGGATATGGTTTTGCTGATAAGATTGCAGATGGCATGGCTATACAAATTCATACGGTTAATCTATTACTTGAAACTCGTGGTGGTTCTCGTCGCCAAGGGGGAGCAACATGGGCACCACCTATGGCATCTATCACCATACGCAACCTTTTGCTGTATACCACAAATGAAAACTGGCAGGTTGTAAATCTTAAGGAAGCACGAGAATTCTCCAGTAACAAGAAGTACATATATGTCTTCAAAAAACTGGAATGGCAATCTTTGTCTATTGATCTTTTGCCTCATCCTGACATGTTCACGGATGTTACATTAGGCTGTTCTCAAGAGGGATCAAACCTGAGGGATGATGATGGTGCAAAACGAGTTTTCTTTGGAGGAGAGCGTTTTATCGAAGGAATATCAGGAGAAGCATATATAACAATTCAGAGAACTGAATTGAACAGTCCACTTGGACTTGAGGTTCAATTGCACATCAATGAAGCTGTTTGCCCTGCTTTGAGTGAACCAGGATTACGTGCCCTTCTCCGCTTTATGACAGGAGTATATGTTTGTCTAAACAGGGGTGATGTTGATTTCAAGGCTCAGCAGCGATCCACTGAAGCTGCAGGGCGTTCTCTTGTCTCAATTGTTGTAGATCATATATTTCTTCGCATTAAAGATACTGAATTCCGGCTTGAGCTTTTGATGCAGTCCCTTTTTTTTTCTCGGGCCAGTCTTTCTGAAGGAGATAATGACAGTAACTTGACCAGGATTACAATTGGTGGATTATTTTTGAGTGACACCTTTTCATGCCCTCCATGTACCTTAGTGCAACCATCAATGCAACCTGTCACAGGAGATGCTTTCCATATGCCAGACTTTGCCAGAAGCTTTTGCCCTCCAATATATCCTCTAGGAGAACAGCAGTGGCAATTGATTGAGGGAACCCCTCTAATATGCCTCCATGCTCTTCAGATCATGCCTTCTCCACTTCCACCGTCCTTTGCTTCTCAAACTGTTATTGACTGTCAGCCTCTTATGATTCATGTCCAGGAAGAATCATGCCTGAGGATATCCTCTTTATTAGCTGACGGTATTGTTGTCAGTCCTGGTGACATTTTACCTGATTTCTCAGTGAAATCTTTTATTTTCACTCTCAAGGGATTGGATCTTACAGTTCCTTTTGACAATGCCAAACTGGATATTTCTAGAAGTGACATGGACAATACAGTCCAGACCTCCTTTGCTGGAGCTAGGCTTCATATTGAAAACCTTTTCTTTTTAGATTCACCCTCAGTGGAACTAAGAATGCTGAACCTTGAGAAGGATCCTTCCTGCTTCTGTCTTTGGGAAGGTCAACCAATTGATGCTAGCCAAAAGAAGTGGACTGCCAGAGCATCCCAGCTTACTTTGTCTCTGGAAGCATGTTCTGGCACAACTGGACACCAAAATCCCCTTGGACAGACTGCAGGATTATGGAGATGTGTGGATCTCAAAGATGCTTGCATTGAAGTAGCTATGGCAACTGCTGATGGCAGTCCGTTGTTGAAAGTTCCTCCTTCAGGGGGTATTGTCAGGGTTGGAGTTGCTTGTGAACAGTATCTGTCCAATACTTCTGTTGATCAGTTATTTTTTGTCCTGGATCTCTGTGACTATTTTGGGAGAATTAGTGAAAAGATAGCAATAGCTGGAAAAAGGAAACAATTGGAAGACATTAGGGACAAATCTTTTAGTGGAAAGCTGATGGACAAGGTTCCTAGTGACACTGCCATGAGTTTAGCAGTGAAAGACCTCCAACTTCAATTTCTGGAGTCTTCTCCAGTGAATTTTGAGGGAATGCCTTTAGTGCAATTTGTTGGAGATGATCTGTTTACTAGGGCCACTCATAGAACTCTTGGTGGGGCTATTGTTGTTTCATCTACTTTACGTTGGGAGAGTGTTGAGATAGGTTGTGTGGATGCTGAGGGGCACTTGGCACGTGAAAATGGCTCATTCTTGAGTTCTAGAGAAAATGCTCCCTCACTGATCGATAATGGATATCCTCAGCTAAGGGCTGTTTTCTGGGTGAATAAGAATGAGAAACATCTGTTGAATGGAAATGCTCATTCTGTCCCCTTTCTGGACATAAGCATGGAGCATGTCATACCATTATATGAACAAGACATGGAGTCTCATAGTTTGAATGTCTCAGCTTCCATATCTGGTGTTCGTCTTGGTGGAGGAATGAACTATGCTGAAGTGCTCCTGCATAGATTTGGAATTCTTGGGCCTGATGGAGCTCCAGGGATGGGTCTTTGTAAAGGGTTGGAAAACTTACAGAGAGGACCATTGTCAAAACTTTTTAAGACAACTCCTCTAATTGTTGATGGTTCTGAAGATGTTGAAAGTACGAGAGAAGGGGAAAAAACCGGTTTTCCACACTTGAAGAAGCCAGATGATGTGGATGTAACTATAGACTTGAGAGACTGGTTGTTTGCTCTTGAAGGTGCGCAAGATATGGCTGAAAAGTGGTGGTTCTCCAGCCTTGAAGATGAAGGTAGAGAAGAGAGGTGTTGGCACACATCTTTCTGTAGTTTACGAGTAAATGCTAAAAGTAGCCCAAAGAACGTGCCAGATGGAAAAGCACAATTGCATAGAATACAACAGCATCCAGTAGAGCTGGTCACGGTTGGAGTTCAAGGGCTGCAAATCCTGAAGCCTCAGACCCAAAAAGACATTCCTTCATCCATGCCAGTTGCAAATGGGGTTAAAAAATTTACTGACACAGTTGGAGGAATTGGTCTTGAAGTTCGCTTGATATTATGTGAGGAGAATGTTGATGATGAAATGACTAATTGGGAAGTAGAAAACCTAAAATTCTCTGTTGAAAAGCCGATTGAAGCAGTTGTAACCAAGGATGAGCTTCAGCACCTCATTTTTCTGTGCAAATCAGAAATTGATTCATTTGGCCGGATAACTGCTGGAATTATACGGCTGCTTAAATTAGAAGGTTCTGTTGGTCAGTCTGTAATAGATCAACTAGGCAACCTAGGAAGTGAAGGCATTGACAAGATTTTCTCTGGTGAAAAGGTTAGTAGAGACGGTAGTGTTGGTAGCAGAGGACTTTCTCCATTACCAAATCTGATAAACGAAGAACACAGGACTTCGGAACAGACATTAACTTTGCTTGAGGAAGCGGTTATGGATTCACAGGCTAAACTTAATGATTTGATCAGTGATATTGGTACTTCAGAATCTTCTTCCTCTTTATCTCTTACCATCGTCAAACTGAGTCAAAAGATCGAGACTATGCAGGGCTTATTGATGCAATTACGGAATCAACTTTAA 3648 0.4287 MESILGRALEYTLKYWLKSFSREQFKLQGRTVHLSNLDIDGDALHSSVGLPPALNVATAKVGKLEITLPSVSNVQTEPIVVEIDTLDLVLEENSDLDASPSANSSTPSAAPAKGGGYGFADKIADGMAIQIHTVNLLLETRGGSRRQGGATWAPPMASITIRNLLLYTTNENWQVVNLKEAREFSSNKKYIYVFKKLEWQSLSIDLLPHPDMFTDVTLGCSQEGSNLRDDDGAKRVFFGGERFIEGISGEAYITIQRTELNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDFKAQQRSTEAAGRSLVSIVVDHIFLRIKDTEFRLELLMQSLFFSRASLSEGDNDSNLTRITIGGLFLSDTFSCPPCTLVQPSMQPVTGDAFHMPDFARSFCPPIYPLGEQQWQLIEGTPLICLHALQIMPSPLPPSFASQTVIDCQPLMIHVQEESCLRISSLLADGIVVSPGDILPDFSVKSFIFTLKGLDLTVPFDNAKLDISRSDMDNTVQTSFAGARLHIENLFFLDSPSVELRMLNLEKDPSCFCLWEGQPIDASQKKWTARASQLTLSLEACSGTTGHQNPLGQTAGLWRCVDLKDACIEVAMATADGSPLLKVPPSGGIVRVGVACEQYLSNTSVDQLFFVLDLCDYFGRISEKIAIAGKRKQLEDIRDKSFSGKLMDKVPSDTAMSLAVKDLQLQFLESSPVNFEGMPLVQFVGDDLFTRATHRTLGGAIVVSSTLRWESVEIGCVDAEGHLARENGSFLSSRENAPSLIDNGYPQLRAVFWVNKNEKHLLNGNAHSVPFLDISMEHVIPLYEQDMESHSLNVSASISGVRLGGGMNYAEVLLHRFGILGPDGAPGMGLCKGLENLQRGPLSKLFKTTPLIVDGSEDVESTREGEKTGFPHLKKPDDVDVTIDLRDWLFALEGAQDMAEKWWFSSLEDEGREERCWHTSFCSLRVNAKSSPKNVPDGKAQLHRIQQHPVELVTVGVQGLQILKPQTQKDIPSSMPVANGVKKFTDTVGGIGLEVRLILCEENVDDEMTNWEVENLKFSVEKPIEAVVTKDELQHLIFLCKSEIDSFGRITAGIIRLLKLEGSVGQSVIDQLGNLGSEGIDKIFSGEKVSRDGSVGSRGLSPLPNLINEEHRTSEQTLTLLEEAVMDSQAKLNDLISDIGTSESSSSLSLTIVKLSQKIETMQGLLMQLRNQL* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01155 1215 Coils Coil 1194 1214 - -
Rops7g01155 1215 PANTHER UNCHARACTERIZED 1 1213 IPR026728 -
Rops7g01155 1215 Pfam N-terminal region of Chorein or VPS13 1 96 IPR026854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01155 Rops-Chr7 15468195 15477623 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01155 - - gmx:100803142 2062.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01155 7 15468195 15477623 Rops7g01155 7 15468195 15477623 ECH