Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01154 ATGGCGAAGTTGACTGGTTTGGGAACTGAACCAGTCACGGGTTCCTTGAACCCTTCCAAGAAGAGAGAGTATAGAGTCACCAATCGTCTCCAAGAGGGTAAGCGCCCTCTATACGCCGTCGTTTTCAACTTCATCGACTCTCGCTACCTCAACGTTTTTGCCACTGTTGGTGGCAATAGGGTTACTGTTTATCATTGTCTTGAAGGAGGAGTTATTGCTGTTTTGCAATCTTATGTAGATGAAGATAAGGATGAATCCTTTTACACAGTGAGCTGGGCATGCAATGTTGATGGGTCCCCATTTGTTGTGGCTGGAGGAATCAATGGTATAATCAGAGTCATTGATACTGGCAGTGAGAAGATACACAAGAGTTTTCTTGGCCATGGGGACTCCATAAATGAAATTAGGACTCAAACTTTGAAGCCATCACTTGTGATATCTGCAAGCAAGGATGAATCCGTCCGGCTGTGGAACGTTCATACTGGAATATGCATTTTGATATTTGCTGGAGCTGGAGGACATCGTAATGAAGTCTTGAGTGTTGATTTTCATCCATCGGATATATATAAAATTGCTAGTTGTGGCATGGATAATACTGTAAAGATATGGTCTATGAAGGAGTTCTGGAGCTATGTAGAAAAATCATTCGCATGGACAGATCTTCCTTCCAAGTTTCCAACAAAATATGTGCAGTTTCCTGTGTTCAATGCTTCAGTTCATTCAAATTATGTTGACTGTAATAGATGGTTGGGTGATTTTATCCTCTCAAAGAGTGTTGACAATGAAATTGTCCTGTGGGAACCTAAAGTGAAGGAACAAACTCCAGGGGAGGGTGTAGTTGACGTCCTTCAGAAATACCCGGTTCCTGAGTGTGATATCTGGTTCATCAAGTTCTCTTGTGATTTCCATTTCAATGCAGCTGCAATAGGCAACAGGGAAGGGAAGATTTTTGTTTGGGAATTGCAGTCAAGTCCTCCTGTTCTTATTGCAAGGTTGTCACATACTCAATCAAAATCTCCAATCAGGCAGACTGCTATGTCCTTTGATGGAAGTACTATTTTGAGCTGCTGTGAGGATGGGACAATATGGCGTTGGGATGATGTTACAAACTCCTCAGCCTAA 1122 0.4225 MAKLTGLGTEPVTGSLNPSKKREYRVTNRLQEGKRPLYAVVFNFIDSRYLNVFATVGGNRVTVYHCLEGGVIAVLQSYVDEDKDESFYTVSWACNVDGSPFVVAGGINGIIRVIDTGSEKIHKSFLGHGDSINEIRTQTLKPSLVISASKDESVRLWNVHTGICILIFAGAGGHRNEVLSVDFHPSDIYKIASCGMDNTVKIWSMKEFWSYVEKSFAWTDLPSKFPTKYVQFPVFNASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKVKEQTPGEGVVDVLQKYPVPECDIWFIKFSCDFHFNAAAIGNREGKIFVWELQSSPPVLIARLSHTQSKSPIRQTAMSFDGSTILSCCEDGTIWRWDDVTNSSA* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01154 373 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 125 162 - -
Rops7g01154 373 PANTHER POLYCOMB PROTEIN 4 370 - -
Rops7g01154 373 MobiDBLite consensus disorder prediction 1 20 - -
Rops7g01154 373 FunFam polycomb group protein FIE1 20 369 - -
Rops7g01154 373 Pfam WD domain, G-beta repeat 172 204 IPR001680 GO:0005515
Rops7g01154 373 Pfam WD domain, G-beta repeat 123 158 IPR001680 GO:0005515
Rops7g01154 373 ProSitePatterns Trp-Asp (WD) repeats signature. 145 159 IPR019775 -
Rops7g01154 373 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 171 206 - -
Rops7g01154 373 PRINTS G protein beta WD-40 repeat signature 145 159 IPR020472 -
Rops7g01154 373 PRINTS G protein beta WD-40 repeat signature 254 268 IPR020472 -
Rops7g01154 373 PRINTS G protein beta WD-40 repeat signature 191 205 IPR020472 -
Rops7g01154 373 SMART WD40_4 68 115 IPR001680 GO:0005515
Rops7g01154 373 SMART WD40_4 279 320 IPR001680 GO:0005515
Rops7g01154 373 SMART WD40_4 161 204 IPR001680 GO:0005515
Rops7g01154 373 SMART WD40_4 230 267 IPR001680 GO:0005515
Rops7g01154 373 SMART WD40_4 118 158 IPR001680 GO:0005515
Rops7g01154 373 SMART WD40_4 325 366 IPR001680 GO:0005515
Rops7g01154 373 ProSiteProfiles Trp-Asp (WD) repeats profile. 125 167 IPR001680 GO:0005515
Rops7g01154 373 SUPERFAMILY WD40 repeat-like 28 366 IPR036322 GO:0005515
Rops7g01154 373 ProSiteProfiles Trp-Asp (WD) repeats profile. 171 206 IPR001680 GO:0005515
Rops7g01154 373 Gene3D - 19 369 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01154 K11462 - gmx:100795288 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01154 7 15453635 15458134 Rops7g01154 7 15453635 15458134 ECH