Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01151 ATGCGTTACTCCTACGTTAGAAATCTATGCACTGGGTCCCGTTCACGTTCTGCCACTAAACTTAACACTCCCAACCCTCAATCCTCTCCTTCTCCGACCCCATCATTCAATGAAAATTCTCCACTCTCAAGTATCAAGCTTAAGCCACCCTCTGATTCAGGTGATTCGGCTGATGTGGTGTTTAAGCAGATTTCTTCTATTTTCTATGGTGGTCAGTCAGTCAAGAGACCTGATTCTGAGGAAATTGATGGCTCAAATGAGTTTGAAAGAATGCCAAATATATCGTGGTTGTCAAACTTATCTCAAAACAATATATTATTGCGACGCAGAGAGCATTCTCAAGAAAAGAAAAGAAAATGTGAGTTTGAACTCTCACAAGAAAACCGTTTTCATAGGTTAATAAAAATCTGTGCAAGGATACTAGGAACAGAGGCTACTGTTGAGTTGTTTGGTAAAGTGGGACGAGAACCGGATGTGAAAGGATACAATGCATTGGTAGAAATATGCATAGATAAGGCCAGGGGAGCTGATAATGAAGAGATTGCATTAGAAGAAATGGGGAAGGTTTTTCACCTTTTTAAATCAATGAAGGAACAAGGTTTAGAGCTAGAAGAGCAAACATATCGCCCACTTCTTTTGTATATAATTGACAAGTGTATGGTTGAAGAGTTTCAATTTTTCTGTCATGTTATCAAAGATAAGAATCCCAGTTCAATTACAAGGCTGGGTTACTATGAAATGATGCTGTGGTTAAGAGTTAATAACGAAGAAAAGATTCAGGATCTTTGTAACTATATTGCAGAGAATGATAGTGTGAACACCCCGGGTTTACGAGAAAGTTATTTATTGGCTTTTTGTGAGAGTGATAAGAAGGACAAGATTTTGGAGCTGTTGGAAATCATGGACATAAAAAAGCTTTCATCTGCCGAATCTGTAGCCAAGATATTTCAGGCATTAGGAAGGCTACTATTGGAACCTGTTGCAGAGAAGTTCCTTTTGGACTTCAAGACAAGTAATCATGAAACAGATAATATTGCAAACTTTATTGCTAGTTATGCTGTTAGCATTCCAAATTTATTGATTGAGGATCTCATAAAGAAATTCAAGGATTTGCACCACAGACTAGAAGTTCCACCTTCTTCCTCATCATACGAGAAGCTCATTTTACATAGCTGTGCATTGCTCAAGGTGCATGTAGCTCTTGATATAGTCGATGAAATGTGTGAAGCAGGCTTGACGTTATCAACTGAGGTGTTAAACTCCATATTACAAATTTGTGATGAAATATCTGAATATAATTTGGTTCATCGGATCTTCTCTACCATATGTCACTACAATTTGGGATCAAATGATCAAACATTCAGATGTATGATAGACATGTTCTTGAAGATGAAAGATCTTGAAGGTGCATGCAAGATGCTTGATGATTTGAAGGAAATGAATTTGAAGCCGACAACAGGCATGTACAAGGCCATAATGGCAGAATGTTTTCAAGAGAAAAACATTAGTGATGGGGTGAGGATCCTTGAGCACATGCTTTGTGCTGACATAAAACCTGATTCACAGACTTTCATCTACCTGATTAGCAACTCCAAAACTGAAGAGGATATAGTGAAGTATTATGAAGAACTGAAGCAATCAGGAACCAGAGCTACAAAGCAAATTTTCATGGCGCTTATAAATGGTTATGCTGCTTGCGGACAGTTGGAGAAAGCAAAACAGGTAATCTTAGATCCATTGATACCAGTGAAGAGCTTGAACCAAATCAAGAGTGTTCTTGTCTCAGTTCTTGCATCACATGGGAAATTGTCTGAGGCTCTTCTTATTTACGAGGAAATCAAGCAAGCTGGACACAGTCTGGATCCAAAAGTTGTTATGAGTCTCATTGAGCACACTCATTCCGATGGAGAGTTGGATAGGTTGCTTCTGCTACTTGATGAAATGAACAATACAGACTATTGGAACGATGCTTGCTATAGGATCATCTTGTATTGTATTAGGAATAAGCATTTAAGTTCTGCTCTTGACTTGTGTAAGCTCCTCAAGGCTGAGTTCCAAAGTGATGAACTAGTTATGGAAGTTCTCTTTGATAAGGTATTTTCTCAAATCGAAGAGTCAGAGTCCAATCACTTGCACACTTGCCTCGAGTTGCTTTCAGAAATCAAGGACAAGCTTGGCCTTTTGCCTCCACAGCAATGTCATGATTCTCTGCTAGGTGCTAGTGTCAACGCCACAAATTTATATAATGCTGGATGA 2256 0.387 MRYSYVRNLCTGSRSRSATKLNTPNPQSSPSPTPSFNENSPLSSIKLKPPSDSGDSADVVFKQISSIFYGGQSVKRPDSEEIDGSNEFERMPNISWLSNLSQNNILLRRREHSQEKKRKCEFELSQENRFHRLIKICARILGTEATVELFGKVGREPDVKGYNALVEICIDKARGADNEEIALEEMGKVFHLFKSMKEQGLELEEQTYRPLLLYIIDKCMVEEFQFFCHVIKDKNPSSITRLGYYEMMLWLRVNNEEKIQDLCNYIAENDSVNTPGLRESYLLAFCESDKKDKILELLEIMDIKKLSSAESVAKIFQALGRLLLEPVAEKFLLDFKTSNHETDNIANFIASYAVSIPNLLIEDLIKKFKDLHHRLEVPPSSSSYEKLILHSCALLKVHVALDIVDEMCEAGLTLSTEVLNSILQICDEISEYNLVHRIFSTICHYNLGSNDQTFRCMIDMFLKMKDLEGACKMLDDLKEMNLKPTTGMYKAIMAECFQEKNISDGVRILEHMLCADIKPDSQTFIYLISNSKTEEDIVKYYEELKQSGTRATKQIFMALINGYAACGQLEKAKQVILDPLIPVKSLNQIKSVLVSVLASHGKLSEALLIYEEIKQAGHSLDPKVVMSLIEHTHSDGELDRLLLLLDEMNNTDYWNDACYRIILYCIRNKHLSSALDLCKLLKAEFQSDELVMEVLFDKVFSQIEESESNHLHTCLELLSEIKDKLGLLPPQQCHDSLLGASVNATNLYNAG* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01151 751 Gene3D Tetratricopeptide repeat domain 583 708 IPR011990 GO:0005515
Rops7g01151 751 NCBIfam pentatricopeptide repeat 453 485 IPR002885 -
Rops7g01151 751 PANTHER OS02G0132600 PROTEIN 32 750 - -
Rops7g01151 751 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 450 484 IPR002885 -
Rops7g01151 751 Pfam PPR repeat 556 576 IPR002885 -
Rops7g01151 751 Pfam PPR repeat 592 617 IPR002885 -
Rops7g01151 751 MobiDBLite consensus disorder prediction 11 54 - -
Rops7g01151 751 Gene3D Tetratricopeptide repeat domain 361 537 IPR011990 GO:0005515
Rops7g01151 751 Gene3D Tetratricopeptide repeat domain 125 323 IPR011990 GO:0005515
Rops7g01151 751 MobiDBLite consensus disorder prediction 11 50 - -
Rops7g01151 751 Pfam Pentacotripeptide-repeat region of PRORP 389 546 IPR033443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01151 Rops-Chr7 15433219 15444556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g01151 284 653 Glycosyltransferase AT1G05670 20.844 1.26e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01151 - - gmx:100306302 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01151 7 15433219 15444556 Rops7g01151 7 15433219 15444556 ECH