Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01141 ATGTGGAGAGATCCAGGAGTTTCGGCTGATTCTTTCTATGAAATTCGCCCCGAGTGCACCGATGTTCCCATTTCTCGATTCAAGATCAAGGCTGGTAAAACACTCAGTGCAAGAAAATGGCATGCTGCATTTACTCCAGAAGGGTATCTGGATATAGGCAAGACTCTAAGCCGAATCTATCGAGGGGGAGTCCATCCATCAATCAAGGGAGAAGTTTGGGAATTTCTACTTGGTTGCTATGATCCCAAGAGTACATTTGAGGAAAGAGATCAGATAAGACAACGCCGAAGGATACAATATGCTACATGGAAGGAAGAATGCCGCCAATTGTTTCCTCTTGTTGGAAGTGGTCAATATATCACAGCACCTGTAATTACTGGAGATGGTCAGCCGATTCAAGATCCATTGGTTCTGTTAGAAACAAACCCATCCAAGGGATTGGCCGTACCTCCTCTAGATAATAATAGACCTTCTAGTAAAGATTCTGCAAATAATTTAGAAAAGGTGACAGACAAGAGAGTAGTCCAGTGGATGTTAACACTCCATCAAATAGGTCTTGATGTGGTTCGCACTGATAGGACATTGGTATTTTATGAGAAGCAAGAAAACTTGTCAAAACTTTGGGATATTCTTGCGGTTTACGCTTGGATAGATAAAGATGTTGGCTATGGTCAAGGAATGAGTGACCTATGCTCCCCTATGATAATTCTTCTTGATGATGAAGCAGATGCATTTTGGTGCTTTGAGCGTCTAATGCGGAGACTACGAGGCAATTTCAGATGCACTGGTAGCTCTGTTGGGGTGGAGACTCAACTAAATAAATTGGCTTTGATTACTGAAGTAATTGATCCAAAACTTCATAAACATTTAGAGCATCTTGGTGGAGGTGACTATCTGTTTGCTTTTCGGATGCTAATGGTCCTGTTTCGCCGAGAATTCTCTTTTTGTGATTCATTGTACCTTTGGGAGATGATGTGGGCTCTCGAATATGATCCTGACTTGTTCTTGATGTATGAAGACCCTCAATCAGCTTCTGAAAAAGCTGAGGGCTCTAAGGGAAAAGCAAAGTCAATACGTCAATGTGGAAAGTATGAGAAAGAAAATATGAAAAATAAAGCAAAGAATGCTGAAGCTCCCCTCCCTATATCTATTTTCCTTGTTGCTAGTGTGTTGAAAGAGAAAAGCACAAAACTACTCCAGGAAGCACGGGGCTTGGATGATGTTGTCAAGATATTGAATGACACAACTGGGAATCTAGATGCCAAAAAGGCTTGCACTGGGGCTATGAAACTTCACAAGAAATATTTGAAAAAGGCCAAGAAACCCTAG 1329 0.4146 MWRDPGVSADSFYEIRPECTDVPISRFKIKAGKTLSARKWHAAFTPEGYLDIGKTLSRIYRGGVHPSIKGEVWEFLLGCYDPKSTFEERDQIRQRRRIQYATWKEECRQLFPLVGSGQYITAPVITGDGQPIQDPLVLLETNPSKGLAVPPLDNNRPSSKDSANNLEKVTDKRVVQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKDVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTGSSVGVETQLNKLALITEVIDPKLHKHLEHLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLMYEDPQSASEKAEGSKGKAKSIRQCGKYEKENMKNKAKNAEAPLPISIFLVASVLKEKSTKLLQEARGLDDVVKILNDTTGNLDAKKACTGAMKLHKKYLKKAKKP* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01141 442 Pfam Rab-GTPase-TBC domain 152 327 IPR000195 -
Rops7g01141 442 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 156 259 - -
Rops7g01141 442 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 35 413 - -
Rops7g01141 442 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 267 435 IPR035969 -
Rops7g01141 442 SMART tbc_4 60 352 IPR000195 -
Rops7g01141 442 Gene3D - 265 441 - -
Rops7g01141 442 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 39 289 IPR035969 -
Rops7g01141 442 ProSiteProfiles TBC/rab GAP domain profile. 63 329 IPR000195 -
Rops7g01141 442 FunFam TBC1 domain family member 15-like 161 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01141 Rops-Chr7 15277046 15284911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01141 - - gmx:100805808 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01141 7 15277046 15284911 Rops7g01141 7 15277046 15284911 ECH