Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g01139 ATGATCACTGCAAGCAAAATCAAATCCGTCGATTTTTACAGAAAAATCCCGAGAGATTTAACTGAGGCATCATTATCTGGAGCTGGGTTATCCATAGTAGCTGCTCTCTCCATGATGTTTTTATTTGGAATGGAACTTCACAATTATTTATCTGTCAGTACCTCTACATCTGTGATTGTTGACAAGAGTTCTGATGGGGACTTTTTACGTATGGATTTCAATATCAGTTTTCCTGCACTCTCATGTGAGTTTGCATCAGTTGATGTTAGCGATGTGCTGGGAACAAACAGGCCGAATATAACAAAAACAGTTCGCAAGTTCTCTATTGATTCAAGTTTAAGAACCACTGGGACTGAATTTCATTCAGGCCCAGCTACTAATGTCATTAAGCATGATGATAAAGTGGATGAAGAATCCCTTGAAGGTTCTTTTGTATTCACGACACACAATTTTGATAGATATGCTAATCAATTTCCAATCACAGTCATCAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCTTGAGACCTTCATGGGAAAAGGCAGCTAAAATAATAAAAGAGAGATATGACCCAGAAATGGATGGTCGCATTCTTTTGGGGAAGGTAGATTGCACTGAACAAGGAGACTTATGCAGGAGGCATCACATACAAGGGTATCCATCAATTCGTATCTTTCGTAAAGGAAGTGATGTCAGAGATGACCATGGACATCATGATCATGAGTCCTATTATGGAGACCGTGATACAGATAGCCTAGTCAAGACAATGGAAAATTTAGTGGCATCTCTCCCTGCAGAGTCTAAGAAGCTACCTTTGGAAGATAAATCCAATGTTCCAGAGAATGCAAAAAGACCAGCACCTTCAGCTGGGGGGTGTAGAATTGAAGGATATGTGCGTGTCAAGAAGGTTCCAGGAAACTTGATCATCTCAGCTAGATCTGATGCCCATTCCTTTGATACTTCTCAAATGAACATGTCGCATGTCATAAACCATTTATCTTTTGGAAGGAAAGTGTCACCTACAGTCATGAGTGACGTGAAGCGCTTGATACCTTATGTTGGTAGCAGCCATGACAGGCTGAATGGTCGGTCATTCATCAATACACGTGATTTAGGAGCAAATGTTACTATGGAGCATTACCTCCAGATAGTCAAAACAGAGGTGATAACTAGAAAAAATTATAAATTAGTTGAGGAGTATGAGTACACAGCGCACAGCAGTGTCGCACATAGTCTACACATTCCTCTTGCTAAGTTCCATCTGGAGCTCTCCCCCATGCAGGTATTAATAACAGAAAATCAGAAGTCTTTTTCACATTTTATTACAAATTTCTGTGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTATGGACTCGATTTTGCACAACACTATTAGAATAATGAGAAAAGTTGAGCTTGGCAAAAATATTTGA 1443 0.3971 MITASKIKSVDFYRKIPRDLTEASLSGAGLSIVAALSMMFLFGMELHNYLSVSTSTSVIVDKSSDGDFLRMDFNISFPALSCEFASVDVSDVLGTNRPNITKTVRKFSIDSSLRTTGTEFHSGPATNVIKHDDKVDEESLEGSFVFTTHNFDRYANQFPITVINFYAPWCYWSQRLRPSWEKAAKIIKERYDPEMDGRILLGKVDCTEQGDLCRRHHIQGYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDSLVKTMENLVASLPAESKKLPLEDKSNVPENAKRPAPSAGGCRIEGYVRVKKVPGNLIISARSDAHSFDTSQMNMSHVINHLSFGRKVSPTVMSDVKRLIPYVGSSHDRLNGRSFINTRDLGANVTMEHYLQIVKTEVITRKNYKLVEEYEYTAHSSVAHSLHIPLAKFHLELSPMQVLITENQKSFSHFITNFCAIIGGVFTVAGIMDSILHNTIRIMRKVELGKNI* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g01139 480 ProSiteProfiles Thioredoxin domain profile. 114 263 IPR013766 -
Rops7g01139 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 479 IPR045888 -
Rops7g01139 480 FunFam Protein disulfide-isomerase 5-4 131 287 - -
Rops7g01139 480 CDD PDI_a_family 145 258 - -
Rops7g01139 480 MobiDBLite consensus disorder prediction 268 291 - -
Rops7g01139 480 Pfam Thioredoxin 145 243 IPR013766 -
Rops7g01139 480 Pfam Endoplasmic reticulum vesicle transporter 289 461 IPR012936 -
Rops7g01139 480 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
Rops7g01139 480 Gene3D Glutaredoxin 134 287 - -
Rops7g01139 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 96 IPR039542 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g01139 Rops-Chr7 15255051 15266550 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g01139 - - gmx:100806869 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g01139 7 15255051 15266550 Rops7g01139 7 15255051 15266550 ECH