Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00577 ATGGGGGGATTCAAGCACTTTGTGATTGTTAAGTTCAAGGCAGGTGTGGAAGTGGAAGAGCTAACAAAAGGGATGGAGAAGTTGGTCTCAGAGATTGATGCTGTCAAGTCCTTTGAATGGGGACAGGATATTGAAAGCCTAGATGTGCTGAGACAAGGTTTCACTCATGCTTTCTTGATGACATTCAACAAGAAAGAAGACTTCACTGCATTTCAGAGCCACCCAAATCATATTGAGTTCTCAGCAACATTTTCAGCAGCTATTGAGAAGATTGTGGTGCTGGATTTTCCTTCGACTCTTGTCAAGGCACCAGCTTGA 318 0.434 MGGFKHFVIVKFKAGVEVEELTKGMEKLVSEIDAVKSFEWGQDIESLDVLRQGFTHAFLMTFNKKEDFTAFQSHPNHIEFSATFSAAIEKIVVLDFPSTLVKAPA* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00577 105 SUPERFAMILY Dimeric alpha+beta barrel 2 98 IPR011008 -
Rops7g00577 105 Gene3D - 2 105 - -
Rops7g00577 105 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
Rops7g00577 105 Pfam Stress responsive A/B Barrel Domain 5 97 IPR013097 -
Rops7g00577 105 PANTHER - 3 99 IPR044662 -
Rops7g00577 105 SMART Dabb_2 4 98 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00577 Rops-Chr7 7350780 7351607 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00577 - - gmx:100500080 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00577 7 7350780 7351607 Rops7g00577 7 7350780 7351607 ECH
Rops7g00577 7 7350780 7351607 Rops3g01056 3 13989325 13990221 PCT