Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00452 ATGGGAAGCGTTTGGTTCATACAAGTGGCGGTGGTATTACTGGCGGTGAGTTCCACCGTCCGGTCGTGTCCACCGTCGGACAGGGCGGCGCTGCTTGCTTTCAAGGCAGCACTCCATGAACCTAACTTCGGAATCTTCAACACTTGGACCGGCACCGACTGCTGCCACAAATGGTACGGCGTAAGCTGCGACAAGGAGACCCGCCGCGTTGCCGACATCAACCTCCGCGGTGAGTCGGAGGAGCCGATCTTCGAGAAGGCTCACCGCACCGGCTACATGACCGGATACATCTCGCCGGCGATCTGCAAACTCGCTCGTCTCTCCAGCATCACAGTCGCTGACTGGAAAGGAATCTCCGGCGAGATCCCTCGCTGCTTAACCACCTTACCTTTCCTTCGAATCATCGACTTCATCGGAAACCGAATCTCCGGCAGCATCCCCTCCGACATCGGCAGACTCCACCGCCTCACGGTGCTTAACTTCGCCGACAACGTTATCTCCGGCACAATCCCAACTTCACTAACGAACCTCACGAGTCTGATGCACCTTGATCTCCGTAACAACCTGATCTCCGGGCCCATTCCACGTGACTTCGGCAGGCTTCAAATGTTGAGTCGGGCCTTGCTGAGTGGTAACCGAATCAGCAGGCCTATCCCGGGCTCAGTTTCTCATATATATCGTTTGGCAGATCTGGATCTGTCTCGTAACCAAGTTTCTGGGCCCATTCCAGAATCTCTGGGTAAAATGGCGGTTCTGTCAACGTTAAATTTGGATATGAATAAGTTATCAGGGCCCATCCCGAACAGCCTATTCAGTTCTGGAATAAGTGACTTGAATTTGAGCCGTAACAGTTTAAATGGATATATCCCTGAGGCTTTCGGTGCAAGATCGTATTTCACGGTTCTGGATTTGTCGTATAACAATCTAAGAGGTTCTATCCCCAAATCTATTTCCTCTGCTTCATATATTGGTCACTTGGATTTGAGTCACAACCATCTTTGTGGCCCGATTCCAGTTGGGTCACCTTTCGATCATTTGGAAGCTTCGTCGTTTGTCTACAACGATTGTCTCTGTGGGAAGCCACTCAAAGCTTGTTAG 1098 0.5146 MGSVWFIQVAVVLLAVSSTVRSCPPSDRAALLAFKAALHEPNFGIFNTWTGTDCCHKWYGVSCDKETRRVADINLRGESEEPIFEKAHRTGYMTGYISPAICKLARLSSITVADWKGISGEIPRCLTTLPFLRIIDFIGNRISGSIPSDIGRLHRLTVLNFADNVISGTIPTSLTNLTSLMHLDLRNNLISGPIPRDFGRLQMLSRALLSGNRISRPIPGSVSHIYRLADLDLSRNQVSGPIPESLGKMAVLSTLNLDMNKLSGPIPNSLFSSGISDLNLSRNSLNGYIPEAFGARSYFTVLDLSYNNLRGSIPKSISSASYIGHLDLSHNHLCGPIPVGSPFDHLEASSFVYNDCLCGKPLKAC* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00452 365 Pfam Leucine rich repeat 276 333 IPR001611 GO:0005515
Rops7g00452 365 Pfam Leucine rich repeat 155 214 IPR001611 GO:0005515
Rops7g00452 365 SUPERFAMILY L domain-like 22 363 - -
Rops7g00452 365 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 10 112 - -
Rops7g00452 365 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Rops7g00452 365 Gene3D Ribonuclease Inhibitor 20 89 IPR032675 -
Rops7g00452 365 FunFam Calmodulin-binding receptor kinase CaMRLK 202 315 - -
Rops7g00452 365 Gene3D Ribonuclease Inhibitor 90 365 IPR032675 -
Rops7g00452 365 FunFam Nuclear pore complex protein NUP107 25 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00452 Rops-Chr7 5629450 5630720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops7g00452 88 365 Receptor kinase-like Gene Family AT5G46330 36.620 1.44e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00452 - - gmx:100804739 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00452 7 5629450 5630720 Rops7g00452 7 5629450 5630720 ECH
Rops7g00452 7 5629450 5630720 Rops3g00707 3 8578774 8580199 PCT