Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00416 ATGGCTTTGATCAATGGCGTCCCAGCCACCGGCAACGGCCTCATCGTCAGCTTCGGCGAGATGCTGATCGACTTCGTCCCGACCGTTTCCGGCGTGTCACTGGCGGAGGCACCTGGCTTCCTCAAAGCCCCCGGCGGCGCCCCTGCCAACGTGGCCATCGCCGTTTCCAGGCTCGGCGGCAAGGCTGCCTTCGTCGGTAAGCTCGGCGATGACGAGTTCGGTCACATGCTCGCCGGGATCTTGAAGGAAAACGGCGTGGTCGCAGATGGCATCACTTTTGACCAAGGCGCACGCACTGCGTTGGCTTTCGTAACCCTACGCGCCGATGGGGAGCGTGAGTTCATGTTCTACAGAAACCCAAGCGCTGACATGCTACTTAAACCAGAGGAACTCAACCTCGAACTCATCAGATCTGCAAAAGTATTCCATTATGGTTCGATAAGCTTGATCGTGGAGCCATGCAGATCAGCACACCTGAAGGCAATGGAAGTTGCCAAAGATGCTGGCTGCCTTCTCTCCTATGATCCTAACCTTCGCTTACCCTTGTGGCCTTCACCTGAGGAAGCTCGTAAGCAAATACTGAGTATATGGGAAAAGGCTGATTTGATCAAGGTCAGTGATGTGGAGCTGGAGTTCCTCACTGAAAGTGACAAAATTGATGATGCTTCTGCTATGTCATTGTGGCACCCCAATTTGAAGTTACTCCTTGTCACTATCGGTGAAAATGGTTCCAGATACTACACCAAGAATTTCCATGGATCAGTAGATGCATTTCATGTCAACACAGTTGATACAACTGGCGCCGGTGATTCCTTTGTTGGTGCTCTATTGACCAAGATTGTCGATGATCAGTCCATACTTGAAGATGAACCAAGGTTAAGAGAAGTACTCAAGTTTGCAAATGCATGTGGAGCAATTACCACTACTAAAAAGGGAGCAATTCCCGCCCTTCCCAAGGAGGAGGATGTTCTGAACCTGATCAAAGGGGCTTAG 993 0.5106 MALINGVPATGNGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGKAAFVGKLGDDEFGHMLAGILKENGVVADGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKDAGCLLSYDPNLRLPLWPSPEEARKQILSIWEKADLIKVSDVELEFLTESDKIDDASAMSLWHPNLKLLLVTIGENGSRYYTKNFHGSVDAFHVNTVDTTGAGDSFVGALLTKIVDDQSILEDEPRLREVLKFANACGAITTTKKGAIPALPKEEDVLNLIKGA* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00416 330 SUPERFAMILY Ribokinase-like 15 327 IPR029056 -
Rops7g00416 330 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Rops7g00416 330 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Rops7g00416 330 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Rops7g00416 330 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Rops7g00416 330 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016301
Rops7g00416 330 PANTHER HEXOKINASE FAMILY MEMBER 14 325 - -
Rops7g00416 330 FunFam Probable fructokinase-2 12 330 - -
Rops7g00416 330 Gene3D - 13 330 IPR029056 -
Rops7g00416 330 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016301
Rops7g00416 330 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00416 Rops-Chr7 5204780 5208415 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00416 K00847 - gmx:100803713 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00416 7 5204780 5208415 Rops7g00416 7 5204780 5208415 ECH
Rops7g00416 7 5204780 5208415 Rops3g00666 3 8122415 8129058 PCT