Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00382 ATGGAAGAAGAGGAAGACATGTCACCACCGTTCTGGCTGCAAAACGACGGCGCCAACCGCCGGGGTCTCCGCCGTTCATACTCCCTATTCCTCAGCTCCGTTGCTTTTGTCATATTCCTTGTGGTGATTGCACTTACTTTTACCTTCATCTTAGTTCCAACATTGCACTCTTTCACTTGCCACATTTTCAAACCCCATTCTGTGAAGAAAAGTTGGGATTCCCTCAACCTTGTTCTTGTTCTCTTTGCCATACTATGCGGTTTCCTTAGCAGGAACAACAGCACCAACGAAAGCCCACGTTCCTACGAAAATCAAAGCTTCTCAAACACACCACAACGAGAGTATGCAAAACCAGACCCTGAAACACCGCGACCATGGTATGAGTACTCAGATCGAACCCCTTATTACAGGTTGAGGAGTTTCAACTCCTACCCGGATCTCCGGCAAGAGTCTACGTGGTTCACCAGAGATGAAAGGTGGCGATTTTACGATGATACCCATGTTAATGGCTACCGTGGATTGGGCTTGGAAAACGAAGAAGAAGAAGAAGAAAAGGACCTTGGCATTAAGAACATAGAAGTGGACACTTTTGTAGCTCGTGACAATGTTCTAAGTAACACGGAGAGAACGAAACAAGCTAGTGAAACACCCAAAAAGATTGAGAAACCGAGAAAGAAGGATTTGGAAGGTGAAAGCTTACAACAGACAGAGAAGAAGAATAAAAAAGCAAGTTCAAGTAAAGAGTTGTTGACATCTTTGAAGGGAAAGAAGAAGAAAGAGAGACAAAGAAGCGTTGAAAATTTTCAGAGCATTCTAAATTCTGAACCTTCTTCACACCCCTCATCGCCATCTTCTTCAGTTTTTCAAAATATTTTCTATTCCAAGAAGAGCAAACACAGGAAACTCAACTCTGCTTCTCCGCCGCCAAAACATCATGTTTCATCCAAGCTTGTATCCAAAACCAAACCACTTCATAGGAATGTGGCAACCCTTAAACCAAGCCAAATGAACAAGGAAGAGGATTTCTATGGCTTGGAAGAAAATGTAATTAGTACTGGCAATGAATCACCTTTGATCCCGATACCTCCACCGCCACCGCCACCTCCGCCGTTCAAACTGCCGGCGTGGAAGTTCAGAGTGCAGGGTGACTTTGTTAGGATAGATAGCATTAGTAGTTCAAGTAGTGGTTCGCCAGATTTAGATGAAGTTGTGGAGTCACCAACCAGTGAAGGCAATAGTAATGGTGGAGAACCTGAAATACTATTGTTCTATCCCAGCCCTGATGTTGATGGTAAAGCTGATAATTTTATTCAAAAGTTCAGAACTGGTTTGAAGATGGAGAAAATGAATTCCACCAAGGAGAAGCAGGGGATAGGGAGATCCAATCTGTCTTCTTCACAAAACCAGAAACCAAAGAAGAAACTGGACCGGGTTGAAAGAACAAAATTCATAAATGCCACCTTGTCTTAA 1470 0.4327 MEEEEDMSPPFWLQNDGANRRGLRRSYSLFLSSVAFVIFLVVIALTFTFILVPTLHSFTCHIFKPHSVKKSWDSLNLVLVLFAILCGFLSRNNSTNESPRSYENQSFSNTPQREYAKPDPETPRPWYEYSDRTPYYRLRSFNSYPDLRQESTWFTRDERWRFYDDTHVNGYRGLGLENEEEEEEKDLGIKNIEVDTFVARDNVLSNTERTKQASETPKKIEKPRKKDLEGESLQQTEKKNKKASSSKELLTSLKGKKKKERQRSVENFQSILNSEPSSHPSSPSSSVFQNIFYSKKSKHRKLNSASPPPKHHVSSKLVSKTKPLHRNVATLKPSQMNKEEDFYGLEENVISTGNESPLIPIPPPPPPPPPFKLPAWKFRVQGDFVRIDSISSSSSGSPDLDEVVESPTSEGNSNGGEPEILLFYPSPDVDGKADNFIQKFRTGLKMEKMNSTKEKQGIGRSNLSSSQNQKPKKKLDRVERTKFINATLS* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00382 489 MobiDBLite consensus disorder prediction 389 415 - -
Rops7g00382 489 Pfam Cotton fibre expressed protein 427 454 IPR008480 -
Rops7g00382 489 MobiDBLite consensus disorder prediction 212 265 - -
Rops7g00382 489 MobiDBLite consensus disorder prediction 205 339 - -
Rops7g00382 489 MobiDBLite consensus disorder prediction 455 469 - -
Rops7g00382 489 MobiDBLite consensus disorder prediction 389 489 - -
Rops7g00382 489 MobiDBLite consensus disorder prediction 94 115 - -
Rops7g00382 489 PANTHER COTTON FIBER (DUF761) 8 461 - -
Rops7g00382 489 MobiDBLite consensus disorder prediction 266 293 - -
Rops7g00382 489 MobiDBLite consensus disorder prediction 94 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00382 Rops-Chr7 4945525 4946994 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00382 - - aprc:113855989 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00382 7 4945525 4946994 Rops4g01906 4 44234435 44236486 PCT