Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops7g00179 ATGGGTGCTTCTCTTCCCCCAAAAGAGGCCAACCTCTTCAAGCTCATCGTTAAATCCTATGAAACCAAACAATACAAAAAGGGCCTCAAAGCAGCCGATGCTATTTTGAAAAAATTTCCAGACCATGGAGAAACTTTATCAATGAAGGGTTTGACGTTAAATTGCATGGATCGTAAATCTGAAGCTTATGAACTGGTTCGCCAAGGATTAAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTATGGTCTCCTTTATCGGTCAGACAGAGAATATAGGGAAGCAATCAAGTGTTATCGAAATGCATTGAAAATAGATCCTGACAATATTGAAATCTTACGAGACCTGTCACTCTTACAGGCTCAAATGCGAGATTTAACTGGCTTTGTTGAGACACGACAACAACTTCTGACTCTTAAGTCAAATCATCGCATGAACTGGATTGGCTTTGCTGTTGCACATCATTTGAACTCTAATGCATCAAAGGCTATTGAAATTCTGGAAGCATATGAAGGGACATTAGAAGATGATTATCCTCCAGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTATACAAGATCTCTTTGTTAGAGGAATGTGGAGTTTTTGAGAGAGCTCTTGAGGAGTTGCAGAAGGAGGAGTTAAAAATTGTTGATAAGCTTGCATATAAAGAACAAGAGGTTTCACTTTTAGTCAAGCTTGGTCGCTTAGAAGAAGGCGAGAAATTGTACCAGGCATTACTTGCCATGAATCCTGACAATTATAGATATTATGAAGGCCTCCAGAGATGTGTTGGGTTATATTCAGAAAATGGCTATTTTTCTCCTGATGAAATAGATCGGTTAGATGCCTTGTACAAAACACTTGGGCAGCAATTTAAGTGGTCTTCTGCTGTTAAGAGAATACCACTAGATTTTCTACAAGGTGATATATTTCGAGAAGCAGCAGATAGCTATATTAGGCCTCTCCTAACTAAGGGAGTTCCATCTCTATTCTCTGATCTTTCTTCTTTATACAATCAACCTGGGAAGGCAGACCTTTTAGAACAACTTTTTCTTGAGTTAGATAATTCAATCAGGAGAACTGGTCAATACCCTGGGAGGGTGGAAAAGGAGCCCCCGTCAACTCTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAGGCGGGGCCAATATGAAATTGCTCTTTCTAAAATCGATGAGGCTATAGATCACACGCCCACCGTCATTGATCTATATTCTGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGCTGCTGCTGCTGCGTTTGCAGAGGAAGCTAGGTGTATGGATCTTGCTGATCGTTATGTTAATACTGAATGCGTTAAACGCATGCTGCAGGCTGATCAGGTGGTTTTGGCAGAAAAAACTGCTGTGTTATTCACAAAAGATGGGGATCAACACAACAATCTCCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCTGCTGAAAGCTATTTCCGCCAAGGTGATCTTGGACTGGCTCTCAAGAAATTTTTGGCAGTGGAAAAGCATTATTCAGATATTACTGAAGATCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACATTGCGCACATATGTGGAAATGCTTAAATTTCAAGACCAATTGCATTCACATGCATATTTTCATAAAGCAGCTACTGGAGCTATCAGATGTTATATCAAATTGCATGATTCTCCTCCAAAGTCAACTGCTGAGGAAGATAATGATATGTCTAAGTTACCTCCGTCTCAGAAAAAGAAAATGAGACAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAGAAGGAGGCAGAAGAAAAGAATGAAGAATCAAGTGCCGGCGGGATATCAAAGTCTGGGAAACGGCATGCAAAACCTGTTGATCCAGATCCACGTGGGGAAAAGTTGTTGCAGGTTGCAGACCCATTGTTGGAAGCCACAAAATACTTGAAGTTGCTGCAGAAGAATTCACCTGATTCATTGGGGACACACTTGCTCTCTTTTGAATTGTATATGAGAAAACAGAAGATTTTGCTCGCCTTCCAGGCTGTAAAGCAGTTAGTGAGGTTGGATGCTGAACACCCTGATTCTCACCGTTGCTTGATTAAATTCTTCCATAAAGTGGAATCCATGAATGTTCCTGTGACGGACTGTGAGAAACTCCTTTGGAGTGTAATAGAAGCCGAGCGGCAAACTATTAGTCAGCTGAATGGGAATTCTCTGTTTGAGACAAATAACTCTTTCCTTGAAAAACATGAAGATTCTTTGATGCATAGAGCTGCTTTTGGAGAAATGTTGTATGTTTTAGATCCCAACAGAAGGTCTGAGGCTGTCAAGATGATTGAAGGGTCAACAAATAATCTTGTGCCCAGAAATGGTGCACTCGGACCAATCGGGGAATGGAAACTTAAAGACTGTATTGCAATTCATAAACTTCTTGGAACAGTCCTTGGTGATCAGGATGCTGCATTGAGATGGAAAGTGCGGTGTGCTGAGTTCTTCCCATACTCTACATACTTCGAGGGCAGTCACAGCTCTGCCTCTCCCAACTCTGCTCTCAATCAGAAATGCAAGAGCACTGAAAATGGGAGTTCTAACCATTCGGTGGGCAATCACAATGTGGAATCGGTCACATCAAATGGGAAACTAGAGGCATTTAAAGATCTCACTATCTGA 2706 0.4109 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKSNHRMNWIGFAVAHHLNSNASKAIEILEAYEGTLEDDYPPENERCEHGEMLLYKISLLEECGVFERALEELQKEELKIVDKLAYKEQEVSLLVKLGRLEEGEKLYQALLAMNPDNYRYYEGLQRCVGLYSENGYFSPDEIDRLDALYKTLGQQFKWSSAVKRIPLDFLQGDIFREAADSYIRPLLTKGVPSLFSDLSSLYNQPGKADLLEQLFLELDNSIRRTGQYPGRVEKEPPSTLMWTLFLLAQHYDRRGQYEIALSKIDEAIDHTPTVIDLYSVKSRILKHAGDLAAAAAFAEEARCMDLADRYVNTECVKRMLQADQVVLAEKTAVLFTKDGDQHNNLHDMQCMWYELASAESYFRQGDLGLALKKFLAVEKHYSDITEDQFDFHSYCLRKMTLRTYVEMLKFQDQLHSHAYFHKAATGAIRCYIKLHDSPPKSTAEEDNDMSKLPPSQKKKMRQKQRKAEARAKKEAEEKNEESSAGGISKSGKRHAKPVDPDPRGEKLLQVADPLLEATKYLKLLQKNSPDSLGTHLLSFELYMRKQKILLAFQAVKQLVRLDAEHPDSHRCLIKFFHKVESMNVPVTDCEKLLWSVIEAERQTISQLNGNSLFETNNSFLEKHEDSLMHRAAFGEMLYVLDPNRRSEAVKMIEGSTNNLVPRNGALGPIGEWKLKDCIAIHKLLGTVLGDQDAALRWKVRCAEFFPYSTYFEGSHSSASPNSALNQKCKSTENGSSNHSVGNHNVESVTSNGKLEAFKDLTI* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops7g00179 901 SUPERFAMILY TPR-like 12 440 IPR011990 GO:0005515
Rops7g00179 901 MobiDBLite consensus disorder prediction 854 885 - -
Rops7g00179 901 MobiDBLite consensus disorder prediction 577 594 - -
Rops7g00179 901 Gene3D - 505 725 - -
Rops7g00179 901 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Rops7g00179 901 PIRSF NAT_A 1 818 IPR021183 -
Rops7g00179 901 MobiDBLite consensus disorder prediction 577 644 - -
Rops7g00179 901 Coils Coil 195 215 - -
Rops7g00179 901 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Rops7g00179 901 MobiDBLite consensus disorder prediction 606 622 - -
Rops7g00179 901 Coils Coil 596 620 - -
Rops7g00179 901 FunFam N-terminal acetyltransferase catalytic subunit (NAT1) 505 725 - -
Rops7g00179 901 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 1 826 - -
Rops7g00179 901 Pfam TPR repeat 84 123 - -
Rops7g00179 901 Gene3D - 2 503 - -
Rops7g00179 901 SMART tpr_5 77 110 IPR019734 GO:0005515
Rops7g00179 901 SMART tpr_5 43 76 IPR019734 GO:0005515
Rops7g00179 901 SMART tpr_5 380 413 IPR019734 GO:0005515
Rops7g00179 901 FunFam N-terminal acetyltransferase A, auxiliary subunit 2 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops7g00179 Rops-Chr7 2587638 2605950 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops7g00179 K20792 - gmx:100776968 1594.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops7g00179 7 2587638 2605950 Rops7g00179 7 2587638 2605950 ECH
Rops7g00179 7 2587638 2605950 Rops4g02184 4 48260684 48276171 PCT