Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03639 ATGGAAAGAAAGATGAAGAGGTCTCTGAGAAAGTTGGGAGTAGTGAAGCATGAGCGCACAAACGTTCTGCCTTTGTCGCAGTTGGAGGAGGTGGCTCAGGCTACCCAGGACATGCAAGACATGAGAGACTGTTACGATAGCTTGCTTTCCGTGGCAGCAGCGGCCGCCAACAGTGCTTATGAGTTCTCAGAGTCCTTGGGAGAATTGGGCTCTTGTCTTCTTGAGAAAACCGCCTTGAATGACGATGAAGAAAGCGGAAAAGCTCTGCTAATGCTTGGTAAAATGCAGTTTCAACTCCAAAAGCTCATCGATAACTATCGCTCTCATATCAATCAGACCATTATCATTCCATCCAACTCTCTTCTGAATGAACTCCGAATTGTTGAGGAGATGAAGCAACATTGTGATGAAAAAAGAGAAGTATATGAGTACATGTTCACAAAATATAGAGAAAGAGGTCGGTATAGAAGCAGAAAAGAAGAGAGTTTTTCCTTGCAACAGTTGCAAACTGCTTGTGATGAATATGATGAAGAGGCTACATTATTTGTTTTCCGGTTAAAATCTCTGAAGCAAGTACAATCATGGAGTCTTCTAACTCAGGCAGCACGTCACCATGCAGCTCAGTTGTGTTTCTTCAAGAAAGCAGTTAAGTCTCTTGAGACTGTAGAGCCACATGTAAAATCCGTAACTGAACAGTGGCACATTGATTACCACTTCGTTGGTCTTGAAGGGGAGGATGAGGATGAGGATGAGGATGTAGATCATGACAATGAAAGTTATGATGAGAATGATGACGGCGAGCTGAGTTTTGACTATGGACAAAATGAACATAAGCAAGATGTTTCTGCATCACAAAACTTTATGAAGGAAAACTTAGAGAGGCTTCACAGGAATTCATTCTCCTTCAGGGTTAGGTCAGTGAGCCAATCTGCCCCCCTTTTTGCTGGTAATAAACCTGATTCTGGTGAAAAGATGAGAAAGATGCAGCCATCTTTATCACGGAAGTTCAATTCGTATGTGCTGCCCACACCAGTTGATGCTAAGATTTCATCATCTTCAAGGTCAAGTAATCAAGTACCTTCCAAAACTAAGACAGACTTAAACGAGTCTGCGAAGAATTTGTGGCATTCATCCCCACTGGAACAAAAGAAGTATGAAAATGTTTTTGGAGACGAGAGGTTTTCTGGTCCTAATATTAGAAATGCACAGTCTATACTCAAGGAGAGTAACAGCAATACTGCCTACACAAGATTGCCACCTCCTTTAATTGATGGTATTTTATCCTCGAATCGGGATTTTGTTGCTGCTTACTCTAAAAAGATTAAAAGACATGCCTTTTCTGGTCCATTGGCTGGTAATTCATGGCCAACCAAGCCTGTCTCAGTAGAAAGTGTTCAATTGTTTTCTGGGCCTCTTTTGCGGACTCCAATTCCACTGCCTCCATCACCATCTCCAAAAGTATCTCCTGGTGCTTTTCCTACTTTTGCATCTTCACCTAAAGTAAGTGAGCTTCATGAACTTCCGAGGCCTCCAACCAGTTCCCCATCCAATTCAAGGCATTTTGGTTTGGTGGGTCATTCAGGTCCATTGGTGTCCAAAGGTCCAAAGCTTTCTGCACCTCCATTGCCAATGCCTCCTCAGGCCATGGCTCGAACTTTCTCCATACCTTCCAGTGGTGCTAAAGTATCAACTATATATGAGGATATAGCTTCTCCTCCTCTGACGCCAATTGCTTTACCTAGTAGTCAGCCGTCATCAGATGGCTCTGAGACTGTTGCTCGGGCTGTTTAG 1791 0.4316 MERKMKRSLRKLGVVKHERTNVLPLSQLEEVAQATQDMQDMRDCYDSLLSVAAAAANSAYEFSESLGELGSCLLEKTALNDDEESGKALLMLGKMQFQLQKLIDNYRSHINQTIIIPSNSLLNELRIVEEMKQHCDEKREVYEYMFTKYRERGRYRSRKEESFSLQQLQTACDEYDEEATLFVFRLKSLKQVQSWSLLTQAARHHAAQLCFFKKAVKSLETVEPHVKSVTEQWHIDYHFVGLEGEDEDEDEDVDHDNESYDENDDGELSFDYGQNEHKQDVSASQNFMKENLERLHRNSFSFRVRSVSQSAPLFAGNKPDSGEKMRKMQPSLSRKFNSYVLPTPVDAKISSSSRSSNQVPSKTKTDLNESAKNLWHSSPLEQKKYENVFGDERFSGPNIRNAQSILKESNSNTAYTRLPPPLIDGILSSNRDFVAAYSKKIKRHAFSGPLAGNSWPTKPVSVESVQLFSGPLLRTPIPLPPSPSPKVSPGAFPTFASSPKVSELHELPRPPTSSPSNSRHFGLVGHSGPLVSKGPKLSAPPLPMPPQAMARTFSIPSSGAKVSTIYEDIASPPLTPIALPSSQPSSDGSETVARAV* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03639 596 MobiDBLite consensus disorder prediction 573 596 - -
Rops6g03639 596 MobiDBLite consensus disorder prediction 245 269 - -
Rops6g03639 596 SUPERFAMILY BAR/IMD domain-like 30 229 IPR027267 -
Rops6g03639 596 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 5 593 IPR037488 -
Rops6g03639 596 CDD BAR 37 225 - -
Rops6g03639 596 MobiDBLite consensus disorder prediction 245 272 - -
Rops6g03639 596 Pfam BAR domain 59 226 IPR004148 GO:0005515|GO:0005737
Rops6g03639 596 MobiDBLite consensus disorder prediction 312 368 - -
Rops6g03639 596 MobiDBLite consensus disorder prediction 331 368 - -
Rops6g03639 596 Gene3D Arfaptin homology (AH) domain/BAR domain 25 258 IPR027267 -
Rops6g03639 596 MobiDBLite consensus disorder prediction 480 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03639 Rops-Chr6 61508891 61513520 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03639 - - gmx:100784870 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03639 6 61508891 61513520 Rops6g03639 6 61508891 61513520 ECH