Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03428 ATGCCATTGTCCCTCTCTCCAAATGTTGCGAACCAATTTCTCCTTATCCAACATGCAGATGCCATTTACCCCGACACTAAGCGGAACTTCATTAAACCACGAACCATCCCAAAAAGATCCCCTGTTGAGCAATTTACGTGCCATCTTCATCAACATCACACACACACACACACAAACACAAAGGACCCCACTCTCTCACTCTCTTTCATCACAGGACACAACACGACCCACTCCTTGTGCCTCTCTGCACCCAAACCGATCCTTTCAACCTTGCTGCTAGTTAGTTCCTCCTTCTCGAGGATGAACAAGAGGCCAAGAACCAGTGTCTACAAGGCAGTTCTTGATCTCCGGAATCGAGAACTCGGTGAACTACCCGCCAGGAATTTCCCTCACCGTATCGGTGGCTCTGAGGATCTTGTCCTTCGACTTGATGAATTCAGGAAGCTGGAAAAGCACAGAGGTTGTGTAAACACTGTGAGCTTCAATGCAGATGGTGACATTCTGGTGTCTGGTTCTGATGACCGGAGGGTTATTCTCTGGGACTGGGAAAGTGGGCGGATTAAGATGTCTTTCCATACTGGTCACTTAAACAATGTTTTCCAGGCAAGGTTCATGCCTCACTCGGATGATCAAAGCATTGTCACTTGTGCTGCTGATGGACAGGTGAGACATGCTCAATTTCATGATACTGTAGTGGAAACTAAGTTACTGGCCAAGCATCAAGGACGGGCTCATAAGTTGGCTATTGAGCCTGGTAGCCCTCATATATTTTATACCTGCGGTGAAGATGGATTAGTACAGCATTTTGATCTGAGAACCAGGGCTGTGACAGAACTTTTTACGTGCCAGCCAATTAAGGATAGATGGAATTACATGCCAGTCATCCATCTGAATGCAATTGCAATTGATCCAAGGAACCCAAATCTCTTTGCAGCTGCTGGGTCTGATGAGTATACTCGGCTTTATGATATCCGCAAGTATAAGTGGGATGGATCAAGCGATTTTGGTCAACCGACTGACTTCTTTTGCCCTCCTCACTTGATTGGTGATGAGCGAATGGGAATTACAGGCTTGGCCTTTTCTGAACAAAGGGAGCTTCTTGTGTCCTACAATGATGAGTTTATTTACCTTTTTACACAAGATATGGGTTTGGGACCGAACCCTGTTCCTGGGTCTCCTATATCTATGAATAGTGATGCAAGTGAAATGGGAGGTAGTCATGGATCTGCGGCATCTCCATCAAACATGGATGCTGATGAGAAAATCACCCCGCAAGTTTTTAAGGGACACAGGAATTGCGAGACAGTGAAGGGTGTTAACTTTTTTGGACCTAATTGTGAGTATGTAGTGAGTGGGTCAGACTGTGGTCGGATTTTCATATGGAAAAAGAAAGGTGGTCAGCTTATTCGTGTCATGGAAGCAGATAAGCATGTTGTGAACTGCATTGAGTCTCATCCTCATACAATGGTTCTTGCAAGCAGTGGTATTGAGCATGACATCAAGATATGGACTCCAAAGGCCCTCGAGAAAGCTACCTTGCCCAAAAATATTGAGCAGATCAATTTTGTGGTTGGGGCTCATGGTTCCGAGTTCTCTGGCCGGGGCAACTCATTTGGGGCATCTTGTAGAGCAGTGTTTGAAATAATGGACTGGACCTATTTGACCATGGTTCTCATGTTTGATCAAATTCATTGGTTTTCAATTGATGGTGATGAGGATATCGTCGATGAGGATGACAATGATGAAGAAGATTATGACGATGATGATATGTTTGATGATGACTATGATGATGATATGTTTGATGACGATGATGATATTGATGATGACGAAGATGATGAAGATTGTGAGGAGGATGAATATATCAATGATTCCGATGATGGTGATTATGACAATGATTGTGATGATGATGATGAGAATGGTAAACCCAAGGCTAGGGGCTGGATGTACCAGATAGCTTCTCCTGAAGACCTGATGTTGCAACTGTTTTCACTTCCAAGAAGGAGGGTTAGGACAGAGAGCAATGGAGAAAACTCAACTGCAGATCGTGAACTCCTAGAGTTGATATTGACATTCAATGCTAATAGTGACACTTCTAACGATGATGATGATGGAGACACAACCAGCCAAGAGGACTTGTTCAGTTGA 2145 0.442 MPLSLSPNVANQFLLIQHADAIYPDTKRNFIKPRTIPKRSPVEQFTCHLHQHHTHTHTNTKDPTLSLSFITGHNTTHSLCLSAPKPILSTLLLVSSSFSRMNKRPRTSVYKAVLDLRNRELGELPARNFPHRIGGSEDLVLRLDEFRKLEKHRGCVNTVSFNADGDILVSGSDDRRVILWDWESGRIKMSFHTGHLNNVFQARFMPHSDDQSIVTCAADGQVRHAQFHDTVVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTRAVTELFTCQPIKDRWNYMPVIHLNAIAIDPRNPNLFAAAGSDEYTRLYDIRKYKWDGSSDFGQPTDFFCPPHLIGDERMGITGLAFSEQRELLVSYNDEFIYLFTQDMGLGPNPVPGSPISMNSDASEMGGSHGSAASPSNMDADEKITPQVFKGHRNCETVKGVNFFGPNCEYVVSGSDCGRIFIWKKKGGQLIRVMEADKHVVNCIESHPHTMVLASSGIEHDIKIWTPKALEKATLPKNIEQINFVVGAHGSEFSGRGNSFGASCRAVFEIMDWTYLTMVLMFDQIHWFSIDGDEDIVDEDDNDEEDYDDDDMFDDDYDDDMFDDDDDIDDDEDDEDCEEDEYINDSDDGDYDNDCDDDDENGKPKARGWMYQIASPEDLMLQLFSLPRRRVRTESNGENSTADRELLELILTFNANSDTSNDDDDGDTTSQEDLFS* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03428 714 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 113 634 IPR045151 -
Rops6g03428 714 MobiDBLite consensus disorder prediction 692 714 - -
Rops6g03428 714 MobiDBLite consensus disorder prediction 391 417 - -
Rops6g03428 714 MobiDBLite consensus disorder prediction 388 417 - -
Rops6g03428 714 Pfam WD domain, G-beta repeat 146 181 IPR001680 GO:0005515
Rops6g03428 714 Pfam WD domain, G-beta repeat 425 462 IPR001680 GO:0005515
Rops6g03428 714 SUPERFAMILY WD40 repeat-like 141 503 IPR036322 GO:0005515
Rops6g03428 714 MobiDBLite consensus disorder prediction 574 642 - -
Rops6g03428 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 149 186 - -
Rops6g03428 714 SMART WD40_4 288 323 IPR001680 GO:0005515
Rops6g03428 714 SMART WD40_4 184 226 IPR001680 GO:0005515
Rops6g03428 714 SMART WD40_4 142 181 IPR001680 GO:0005515
Rops6g03428 714 SMART WD40_4 341 379 IPR001680 GO:0005515
Rops6g03428 714 SMART WD40_4 420 462 IPR001680 GO:0005515
Rops6g03428 714 SMART WD40_4 465 504 IPR001680 GO:0005515
Rops6g03428 714 SMART WD40_4 230 270 IPR001680 GO:0005515
Rops6g03428 714 MobiDBLite consensus disorder prediction 574 635 - -
Rops6g03428 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 149 190 IPR001680 GO:0005515
Rops6g03428 714 Gene3D - 142 506 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03428 Rops-Chr6 58931143 58937603 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03428 K11804 - gmx:100794236 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03428 6 58931143 58937603 Rops6g03428 6 58931143 58937603 ECH