Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03426 ATGGAGGGGTTAACAGGGCTGAGCCACCTTTTTGTGACAATGTTTCTCTCAGGCTTTGGTGGTTGCATAGTTATTCCGGTAATTACAGACGTCACCATGGCTGCACTTTGTCCAGGTCAAGATCAGTGCTCACTTGCCATTTACCTCACTGGCTTCCAGCAAGCTATGATTGGAGTGGGGTCTGTGGTGACGACGCCATTAATAGGGAACTTGTCCGACCGATACGGCAGGAAAGCCTTGCTCACACTTCCTCTCACGGTGTCTGTCATCCCCCAAGTCATATTGGCATATAGCAGGGAGACCAAATTCTTCTACGTGTACTATGTGGTGAAAACTCTTGCAGCCATTGCAGGGGAAGGCTGCTTCCATTGTCTTGCTCTTGCATATGTGGCAGACAAGGTTACAGATGGGAAAAGAGCATCAGCATTTGGAGTACTTGCTGGTGTAGGATCAGCATCATTCGTTGGTGGAACATTAGCTGCTCGTTTCCTATCCACTGCTTTGACATTTCAGGTTGCTGCAGCCTTTTTAATGATTGCATTGGTGTACATGAGAATTTTCCTTGAAGAAAGTGTGCTTGATGGTGGCATGAAGCAGCCATTATTGAAACAGGATGGTGAGGAACCATGCGCTGAACAGTGTGAGAATGATTCATCACGAAGGACAACAGGAACATTTAAGAAACTGCCTTCAGTGGGGGATTTAATTTGTTTGCTCAAGTGTAGCCCCACATTCTCACAAGCAGCAGTTGTTTTGCTTTTCAATAGTCTTGCAGATGGTGGCTTGATGGCTATATTGCTGTATTATTTAAAGGCACGTTTTCAATTCAACAAGAACCAGTTTGCTGATTTGATGATGATTACTGGGACTGGATCAACTCTTACACAAATATTTTTCATGCCCATATTAGTACCTGTAATAGGAGAGGAGAAGTTGCTCTCAACAGGGCTCTTAGTTAGCTGCATAAATATCTTGATCTACAGCATATCGTGGGCAGGATGGGTTCCTTATGCTCTAGCAGGTTGCTCTATTTTTGCAGTTTTTGTGCGCCCAAGTATATGCAGCATTGCATCAAAACAAGTTGGACCTACTGAACAGGGAATGGTTCAAGGATGCCTTTCAGGAATTGGTTCCTTGGCCAACATCATTGCTCCATTAATTTTCAGTCCACTGACAGCCTTATTCCTGTCGGAAGAAGCACCATTTTATTTTCCTGGCTTCAGTTTAATGTGCCTTGGACTAATACTGATGATAGCATTTTTCTTAAGTCTAATGATCCGTGCTGCTCCTCCTATTGCGGGTTGCAAGATTAGTAGTAACCGCTGCACGGATACCTTGGTATGA 1344 0.4427 MEGLTGLSHLFVTMFLSGFGGCIVIPVITDVTMAALCPGQDQCSLAIYLTGFQQAMIGVGSVVTTPLIGNLSDRYGRKALLTLPLTVSVIPQVILAYSRETKFFYVYYVVKTLAAIAGEGCFHCLALAYVADKVTDGKRASAFGVLAGVGSASFVGGTLAARFLSTALTFQVAAAFLMIALVYMRIFLEESVLDGGMKQPLLKQDGEEPCAEQCENDSSRRTTGTFKKLPSVGDLICLLKCSPTFSQAAVVLLFNSLADGGLMAILLYYLKARFQFNKNQFADLMMITGTGSTLTQIFFMPILVPVIGEEKLLSTGLLVSCINILIYSISWAGWVPYALAGCSIFAVFVRPSICSIASKQVGPTEQGMVQGCLSGIGSLANIIAPLIFSPLTALFLSEEAPFYFPGFSLMCLGLILMIAFFLSLMIRAAPPIAGCKISSNRCTDTLV* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03426 447 ProSiteProfiles Major facilitator superfamily (MFS) profile. 6 431 IPR020846 GO:0022857
Rops6g03426 447 Gene3D MFS general substrate transporter like domains 6 422 IPR036259 -
Rops6g03426 447 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 7 425 - -
Rops6g03426 447 SUPERFAMILY MFS general substrate transporter 10 422 IPR036259 -
Rops6g03426 447 Pfam Major Facilitator Superfamily 10 188 IPR011701 GO:0022857|GO:0055085
Rops6g03426 447 CDD MFS_SLC46_TetA_like 10 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03426 Rops-Chr6 58913017 58924860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03426 2 430 Organic Solute Cotransporters AT2G16990 47.717 3.07e-128 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03426 - - gmx:100805770 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03426 6 58913017 58924860 Rops6g03426 6 58913017 58924860 ECH