Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03424 ATGGGCAGCCAGAAAAATGCAGCATCAACAAGTAGCCCAAAGAAAGAGTCAAGAACACTTCAGGATCTATTTGTGCAGGAGAAGCCTCATTTCTCAATCTCATCTCCACCTACTTCAGGAAATGAAGAACTTCTCTCTGCTATTTCTTATTGCACCTTTGTTTTCAACTTCACTGATCCTTCAGAATCTCCTGCACAGAGAGACTCCAAGAGGCTCCAACTCTCAAGGCTCATTGCTATATTGAAGTCCTCCAAGAAACCAGTGCATGAGAAAGTTTTGGGACCTCTAGTGGCCATGATCTCAGCCAATCTCTTCAGGCCACTCCCTCCACCAGCCAACCCTTCTGCAATCTCAGACTTGCTTGAAGAAGAAGACCCCATCTCCATATTTTCACCAATATGGTCACATCTTCAGATAGTGTATGAAATCCTTCTCAGGGTTGTTATTAGCACAGAAAAAAAGATACTGAGAGAGTATATAGATGATTCTTTCCTCCTCAATCTCCTAACACTTTTCCAGTCTGAAGATCCAAGGGAACGTGAAAGTTTGAAAAATGTGTACCACAAGATATATTCTAAGTTCTCTTCTGACCGTTCCATGATGAGGAAATCAATGACTGATGTGCTCTTGAACTATGTGTTTGAGACAGAGAAGCATCCTGGTATTGGAGACTTGCTTGAGATATGGGGAACCATAATCAATGGCTTTATTGTGCCACTCAAGGAAGAGCACAAGTTGTTCCTCATGAGAGTGCTCATTCCTCTACACAAGACCAAGGGGATGCAAGTGTACCACAGGCAACTGGCTTACTGTGTATCACAGTTTGTGCAGAAGGAGCCTATGCTTGGAGGGGTAGTTGTTAGGGGAATTTTGAGATACTGGCCTGTTTCAAACTGTCAAAAAGAAATCTTGCTAATTGGGGAGTTGGAAGATCTGTTGGAGAATTTAGACCCTGACCAGTATCGTAAGTTGGCCTTGCCCATATGTACCCAGATTACAAAATGCATAAACAGTTGGAATTCCCAGGTAGCCGAGCGTGCACTCTATGTATGGAACAATGAGCAGTTCTTCAAAATGGCATCAACAGGAACAGTAGATGTATTTCCTGTCATAGTAGAAGGCATAGAAAAGAACCTGAAGTGGCATTGGAGCAAGAGTGTTAGGCAACTAACAGAGTGTGTCAAGGTGATGCTGGAAGAAATGGATCCAGATCTATATGCCAAGGTTCTCATGGAAACTAAAGAATCATTGGCACATCAACAAGATATGAAGAGGAAAAAGAGATGGGAAAGAATAGAATTGGCAGCTGCAGCTAAGAATCACTTTCTCAGTCCACAACGTTATATGTGTGTCTCCCACTGA 1362 0.4266 MGSQKNAASTSSPKKESRTLQDLFVQEKPHFSISSPPTSGNEELLSAISYCTFVFNFTDPSESPAQRDSKRLQLSRLIAILKSSKKPVHEKVLGPLVAMISANLFRPLPPPANPSAISDLLEEEDPISIFSPIWSHLQIVYEILLRVVISTEKKILREYIDDSFLLNLLTLFQSEDPRERESLKNVYHKIYSKFSSDRSMMRKSMTDVLLNYVFETEKHPGIGDLLEIWGTIINGFIVPLKEEHKLFLMRVLIPLHKTKGMQVYHRQLAYCVSQFVQKEPMLGGVVVRGILRYWPVSNCQKEILLIGELEDLLENLDPDQYRKLALPICTQITKCINSWNSQVAERALYVWNNEQFFKMASTGTVDVFPVIVEGIEKNLKWHWSKSVRQLTECVKVMLEEMDPDLYAKVLMETKESLAHQQDMKRKKRWERIELAAAAKNHFLSPQRYMCVSH* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03424 453 MobiDBLite consensus disorder prediction 1 21 - -
Rops6g03424 453 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 37 434 - -
Rops6g03424 453 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 19 439 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops6g03424 453 SUPERFAMILY ARM repeat 42 432 IPR016024 -
Rops6g03424 453 Gene3D - 36 434 IPR011989 -
Rops6g03424 453 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 32 436 IPR002554 GO:0000159|GO:0007165|GO:0019888
Rops6g03424 453 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03424 Rops-Chr6 58891159 58892907 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03424 K11584 - gmx:100802007 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03424 6 58891159 58892907 Rops6g03424 6 58891159 58892907 ECH