Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03419 ATGAGAAATTCCTCAACTTGGGTGGAATATAAGAATGATCTATTTGATGATTATGGAGGAATGGATTCGGGAAGTCATTTACTAACCTTAGGAAGGTTATATGCATGGGAAAAGAAACTGTTTGAGGAGGTTAAGGCTGGAGATAGCACACGGAAAAATTATGAGAAGAAATGCACACAGTTGAGAAATAAGAACGTTAGAGGAGATGATGAACTAAGCACGGACAAAACTAGAGCTGAAGTCAAAGATCTATATGCTGGGATCTTGGTTGCAATTCGACGTGCAGAGTCAATCTCAAAGAGAATTCAGAAAATGAGAGATGAAGAATTACAACCTCAAATTGTTGAACTATTAAAAGGCCTGACACAATCATGGAAAATTATGTTGGAGTCCCATGAAACCCAGAAGAAGATTCTTTCCGAAGTAAAGTATTTCACATGTCCTGCATATGGGAAATTCTGCAATCAATCTCGTGGATTGGCAACTCTTCAGCTTGAAACCGAGCTTCACCATTGGCGTGTGTGCTTTAGAGAGTATACTGCAGCTCAAAAAGGATATGTTGAAGCTTTGCATGGATGGCTAAGCAAGTTAATAGTCCCTGAAGTTGAATTTTACTCAAGAAGCAAAAATGTTGCTATGCCATATCCATATCAAGTCAAAGGGCCACCACTACTTGTGCTATGCAATGACTGGTTAACTTCCCTTCAAAAGTTACCTGATAAAATGGTAACACTTGCATTGAAAAGCATGGTGAAGGATGTGAGAGCTCTGTGGCTTCAGCAAAATAAAGAGCAGCAGCAGAAAAGGAAAGTAGATAGCCTAACAAAAGATCTAGACAGAAGATTTTCAGGGTTGCATAAAGTGAAGACTAAGATGCTTCTGTTGCAAGACACAGACCAGAAATCTGAGGTGGGATCAGATCATCAAGATGAATGCATGATGGAGAAGAATGATCATTTGGAGACTCAGAGAAGAAAAGTGGAGGTGGAGAACGAGAAGTTCCAAAGTTGCATGCAAGAAACGCAGAGGATCACATTACATGGATTGCAATCTGGGTTTTCTCTAGTCTTTGAATCTTTGACAGAGTTCTCCAAAGCATCACAAAAAATGTACAATGATCTTGTAACTTATAGTGAGAATAGCGAGAAGGATGGGAACATCTCGTATATAGAGAGTGGTTGCAATGTTGAAAATTGCAACAACCAAAATGGAAAATAG 1218 0.3916 MRNSSTWVEYKNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVKAGDSTRKNYEKKCTQLRNKNVRGDDELSTDKTRAEVKDLYAGILVAIRRAESISKRIQKMRDEELQPQIVELLKGLTQSWKIMLESHETQKKILSEVKYFTCPAYGKFCNQSRGLATLQLETELHHWRVCFREYTAAQKGYVEALHGWLSKLIVPEVEFYSRSKNVAMPYPYQVKGPPLLVLCNDWLTSLQKLPDKMVTLALKSMVKDVRALWLQQNKEQQQKRKVDSLTKDLDRRFSGLHKVKTKMLLLQDTDQKSEVGSDHQDECMMEKNDHLETQRRKVEVENEKFQSCMQETQRITLHGLQSGFSLVFESLTEFSKASQKMYNDLVTYSENSEKDGNISYIESGCNVENCNNQNGK* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03419 405 Pfam Protein of unknown function (DUF632) 12 255 IPR006867 -
Rops6g03419 405 PANTHER UNCHARACTERIZED 11 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03419 Rops-Chr6 58840052 58844351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03419 3 278 Acyl Lipid Metabolism Gene Families AT2G27090 37.143 5.65e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03419 - - gmx:100807897 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03419 6 58840052 58844351 Rops6g03419 6 58840052 58844351 ECH