Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03319 ATGATGGTAAGTGGGGAGACCATGATGGATGACTGCATCGTTAAACCGCCGGAATCTGCGGTGGCGACGCCACTTTCGGCCATAGTGGAGGCGTTTGAAGAGCTCTCAAAAAAGATGAAGGAAAGGAAGGAAGGGGAAGAGATGCGCTTGGATACATTCTGCGAGGCTTCTTCTCTTGTCTCTATTCTCTTTCGCTCTCTTGGCCTTGCTTTCAAATTTGCTGAATTGGAATACGTCGCTAAGCTACATGGACTACTGGAAGCATCAAAGACATGTCACACCCTACAGGATATACTTGACCTTGATGTTGCCAGTGACACAGTGAAAACATCAGGAAGCTGTTCACGTAATCTGCGTAGAGTTCGGCAGGGTCTTGATCTAGTCAGAGTTATATTCGAACAACTTTTATCAACTGATGATAGTTCTCTAAAAGAAGTGGCTTCAACAGCTTATGGACAGGTTTGTGCACCATATCACACATGGGCAGTAAGAACAGCTGTGTATGCTGGGATGTATACACTTCCAACGAGAGACCAACTTTTGGTGATGCTCAATGAAACAGAGCAATCAGCTGAGAAGAAGATGAGAAGGTACATTAGTGCCTCACTTCCAATTATTGAATACATTGATAAACTGTACGTTTCTCGAAATATTAAGTTGGACTGGTAA 669 0.438 MMVSGETMMDDCIVKPPESAVATPLSAIVEAFEELSKKMKERKEGEEMRLDTFCEASSLVSILFRSLGLAFKFAELEYVAKLHGLLEASKTCHTLQDILDLDVASDTVKTSGSCSRNLRRVRQGLDLVRVIFEQLLSTDDSSLKEVASTAYGQVCAPYHTWAVRTAVYAGMYTLPTRDQLLVMLNETEQSAEKKMRRYISASLPIIEYIDKLYVSRNIKLDW* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03319 222 Pfam Glycolipid transfer protein (GLTP) 49 185 IPR014830 GO:0005737|GO:0120009|GO:0120013
Rops6g03319 222 Gene3D Glycolipid transfer protein 18 222 IPR036497 -
Rops6g03319 222 Coils Coil 29 49 - -
Rops6g03319 222 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 23 213 IPR014830 GO:0005737|GO:0120009|GO:0120013
Rops6g03319 222 FunFam Accelerated cell death 11 17 222 - -
Rops6g03319 222 SUPERFAMILY Glycolipid transfer protein, GLTP 42 222 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03319 Rops-Chr6 57659758 57662738 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03319 18 222 Acyl Lipid Metabolism Gene Families AT4G39670 67.943 3.62e-102 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03319 - - aprc:113872428 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03319 6 57659758 57662738 Rops6g03319 6 57659758 57662738 ECH