Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03235 ATGCCAGAAATTCAGTTGGGTATGCACACTATCAGATCACATGGAGCTAGGGTCGCAAGGATACATATGCATGACTGGTTGATTCTTTTGCTTCTTGTGATCATTGACGCTGTCTTGAATATAATAGAGCCATTTCACCGTTTTGTTGGAGAGGGGATGATGACAGACCTTAGATACCCACTGAAAGATAATACCATTCCCTTTTGGGCTGTGCCAATAATAGCAATATTGTTGCCACTTGCTGTCATTCTTGTGTACTATTTCATTCGAAAGGATGTTTATGATTTCCACCATGCTATATTGGGTCTTCTATTTTCTGTACTCATTACTGCGGTGATAACTGACGCTATCAAAGACGGTGTTGGACGGCCACGGCCAGATTTCTTCTGGCGTTGTTTCCCTGATGGAAAAGGGGTGTTTGATCCAGTAACAAGCGATGTTAGGTGCACCGGAGATAAGAGTGTTATTAAGGAAGGGCACAAAAGTTTCCCAAGTGGACATACCTCTTGGTCCTTTGCTGGTCTTGTTTATCTTGCTTGGTATCTATGTGGAAAAATTAGAGTATTTGACCGTAGGGGCCACGTTGCAAAGCTCTGTCTTGTTTTCTTACCAATCCTCATGGCAGCTTTGGTTGCTGTCTCTCGTGTTGATGATTATTGGCATCATTGGCAAGATGTGTTTACCGGAGGTCTTATAGGGACAACAGTTGCTTCCTTTTGTTACTTACAATTCTTCCCACCTCCGTATGACATAGATGGTTGGGGACCTCATGCATATTTCCAGATGTTAGCTGAATCTCGAAATGGTGCTCAGCCTACTTCCGCCAATAATGACAATCATCTTGCTCTATCTGCTGAGCTTCAAGCTGTAACTTTGTATATCCCACCTCAACATGATGGAGACACACGAGGCAATAGCTGGGATTCAAGCCCAATTTTAGGTGGATCACAGAATGTAAGGACACACTGA 969 0.4324 MPEIQLGMHTIRSHGARVARIHMHDWLILLLLVIIDAVLNIIEPFHRFVGEGMMTDLRYPLKDNTIPFWAVPIIAILLPLAVILVYYFIRKDVYDFHHAILGLLFSVLITAVITDAIKDGVGRPRPDFFWRCFPDGKGVFDPVTSDVRCTGDKSVIKEGHKSFPSGHTSWSFAGLVYLAWYLCGKIRVFDRRGHVAKLCLVFLPILMAALVAVSRVDDYWHHWQDVFTGGLIGTTVASFCYLQFFPPPYDIDGWGPHAYFQMLAESRNGAQPTSANNDNHLALSAELQAVTLYIPPQHDGDTRGNSWDSSPILGGSQNVRTH* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03235 322 MobiDBLite consensus disorder prediction 300 322 - -
Rops6g03235 322 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 21 249 IPR036938 -
Rops6g03235 322 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 19 250 - -
Rops6g03235 322 PANTHER LIPID PHOSPHATE PHOSPHATASE 12 275 IPR043216 GO:0006644
Rops6g03235 322 SMART acid_phosph_2 98 241 IPR000326 -
Rops6g03235 322 CDD PAP2_containing_1_like 55 244 - -
Rops6g03235 322 FunFam Lipid phosphate phosphatase 2 20 252 - -
Rops6g03235 322 MobiDBLite consensus disorder prediction 302 322 - -
Rops6g03235 322 Pfam PAP2 superfamily 100 245 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03235 Rops-Chr6 56212737 56218019 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03235 1 290 Lipid Metabolism Gene Families AT1G15080 77.320 1.50e-160 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03235 K18693 - gmx:100805924 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03235 6 56212737 56218019 Rops6g03235 6 56212737 56218019 ECH