Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03149 ATGAAGTCGCTATCTCTATTTGCGTTTCTCTGTGCAATTTGTGTCCACTCCATCGGCGCCACCTCCTCCGTTGCCTATCCTTCCATCCCCGGCGTCGATTCCGGCGACTGCTCCCTTACCGGCGACGAGAGTGTTCTTATCCCTCCACGGCGAGAAGTGTACGATGAGGGACGAATCTTCGATATCACCCACAGGTACACGAGTGAGATGCCGGTGTGGGACTCGAAGGAAGGGTTAGGGCACTTCTTGTGGCTCGCCACGAGCATGAAAAATGGCTCACGCGCCAATAACTCAGCCATGAAGCTTGGTGTTCACACCGGCACCCACGTCGACGCGCCCAGCCACTTCTACGACAATTACTTTGACGCTGGCTTCGACGTCGATACCCTCGACCTACGAGTCCTCAATGGCCTTGCACTTTTGGTTGATGTTCCACGGGATAAAAACATTACTGCTGAAGTTATGAAGTCCTTGAACATCCCTAGAGGTGTAAGCCGGGTGCTCTTCAGAACATTAAATACTGACAGGCGGCTTATGTTTAAGAAGGAATTTGACACAAGCTATGTGGGATTCAAGGAGGATGGAGCAAAATGGCTGGTGGAGAACACTGATATCAAACTTGTAGGAGTTGATTACTTATCTGCTGCTGCTTATGATCACTCAGCCCCATCTCATCTTGTTTTTCTGGAAAGCAGGACAATGAGGTCCATGCGAGTTGCACCCTTTGATCAATCATATTTATCTCCACTGCCAAATAAGGGTGAAACATCCGCAGAAAACAACATAACCCAGAAGATAATTAGTGGTGTTCACAAGAAGCAGTGTGATGCAGCTAAGCTGATAGTATTAATATGTTGA 858 0.4848 MKSLSLFAFLCAICVHSIGATSSVAYPSIPGVDSGDCSLTGDESVLIPPRREVYDEGRIFDITHRYTSEMPVWDSKEGLGHFLWLATSMKNGSRANNSAMKLGVHTGTHVDAPSHFYDNYFDAGFDVDTLDLRVLNGLALLVDVPRDKNITAEVMKSLNIPRGVSRVLFRTLNTDRRLMFKKEFDTSYVGFKEDGAKWLVENTDIKLVGVDYLSAAAYDHSAPSHLVFLESRTMRSMRVAPFDQSYLSPLPNKGETSAENNITQKIISGVHKKQCDAAKLIVLIC* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03149 285 Gene3D Putative cyclase 53 254 IPR037175 GO:0004061|GO:0019441
Rops6g03149 285 PANTHER CYCLASE-LIKE PROTEIN 2 9 233 IPR007325 GO:0004061|GO:0019441
Rops6g03149 285 FunFam Uncharacterized protein 54 210 - -
Rops6g03149 285 Pfam Putative cyclase 60 215 IPR007325 GO:0004061|GO:0019441
Rops6g03149 285 SUPERFAMILY Putative cyclase 57 231 IPR037175 GO:0004061|GO:0019441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03149 Rops-Chr6 54965052 54970919 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03149 - - gmx:100800277 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03149 6 54965052 54970919 Rops6g03149 6 54965052 54970919 ECH