Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03147 ATGGGCAAAACAAGTACAAGGTCAGATTCAAAGTCCGACCGCAAGTTCGAAAAGAAGCTACAATTTTATTCCAAGGTGAAAGATGCTGTTGCTTCCTTGAGTGCCCAAAAATCTATTACTAAAAAGAAGAACAAACAACAAAGGCGGCAGAACAAATTGAAGGCATACAACCTCTCCTCACTCTTAGATTCCCTTCCTGAGTTGAAGGCATCACGGAAACCAGCACGTGAGGATGACTTCAAACTTAATTGTAAATCTAGGAAGAAGTTAATATTGAAGGAAGGAGAACGTTTATCCGCGGTTCTTGAGGATCATTTCTTCCAAGCGGATCCCCTGTCTGCCATTCATCAACATTTACAGCACACACAACCGGTTGTAGAGGAACAACCGAAGAAAAAAGTGAACAAAAATGGATCCAAGAAGAAGAAGAAATCAAAGGCTTCAACTGGAGTACGGTCTATGGATATGTAA 471 0.4098 MGKTSTRSDSKSDRKFEKKLQFYSKVKDAVASLSAQKSITKKKNKQQRRQNKLKAYNLSSLLDSLPELKASRKPAREDDFKLNCKSRKKLILKEGERLSAVLEDHFFQADPLSAIHQHLQHTQPVVEEQPKKKVNKNGSKKKKKSKASTGVRSMDM* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03147 156 MobiDBLite consensus disorder prediction 118 156 - -
Rops6g03147 156 MobiDBLite consensus disorder prediction 36 55 - -
Rops6g03147 156 Pfam Ribosome biogenesis protein SLX9 8 122 IPR028160 GO:0000462|GO:0005730|GO:0030686|GO:0030688
Rops6g03147 156 PANTHER PROTEIN FAM207A 5 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03147 Rops-Chr6 54947774 54949922 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03147 - - gmx:100527125 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03147 6 54947774 54949922 Rops6g03147 6 54947774 54949922 ECH