Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03111 ATGGAAGATGGAGATTGGGTTCTGGTGCGTGGCCCCCCACAGAAGGACTGGTGGAACCCAAGTTTAACCAATGTAGAGGATGAACCTCCCAGACCCTTGAAGGTTACTTTTTCTGGGCCTGCAACGCACTGGACCGATGCCATCCCCATAGGAAATGGCCGTCTTGGGGCCATGGTTTGGGGTGGTGTACCATCAGAAGTTCTCCAGCTCAATGTGGACACACTTTGGACTGGGATACCTGGCAACTACACCAACAAAAATGCTCCTGAAGCACTGGCTAAAGTTCGAAAACTTGTTGATGATAGAAAATACTCTGAAGCTACGGCTGCAGCTGTCAAGTTATCAGGAGATCCTTCTGATGTATACCAACTTCTCGGTGATATCAAATTAGAATTTGATGATTCTCATCTCAAATATTCAAAAGAGTCTTATCTCAGGGAGCTGGATTTGGATACCGCAACAGCAAAAATAAAATACTCTGTGGGTGATGTAGAATTTACCAGAGAACATTTTGCTTCTAATCCAGACCAAGTGATGGTAACAAGGTTTTCCGCAAGCAAGTCAGGGTCATTATCATTTACAGTGTCTTTGGATAGCAAATTACATTACACTTCACGGGTAAGTGGCCAAAATCAGATAATGATGGAAGGAAGCTGTCCTGGCAGTAGGATCAGGCCAAAAGTGAGTTCAAGTGACAATCCAAAGGGAATTCAGTTTTCTGCAGTTCTTGATATACAGATTAGTAATGACAAAGGGGTTATACATGTTTTGGACGATAAGAAGCTAAGGGTTGAAGGTTCAGATTGGGCTATTTTGCTTCTGACAGCTGCTTCTTCTTTTGATGGGCCATTTACTAAGCCTGAAGACTCTAAGAAGGATCCTACTTCTGAGTCCCTCAGTAAAATGAAGTCTGCAAAAAGTTTTTCATATACTAATCTTTATGCACGTCACTTGGATGACTATCAGAATCTATTTCATCGGGTTTCATTGCAACTCTCTAAAAGCTCCAAGACTGTTTTGGGAAAATCTGTTTTGGATGAAAGGAAATCGGTTTCCTCTCAAACTAACATATCTCCAATGGGAGGTGGTGATACCATTCCAACTTCAGCGAGAGTCAAATCATTTCAAACTGATGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGTCGATATCTTCTAATTTCTTGTTCACGTCCTGGAACTCAGGTGGCAAACCTACAGGGTATATGGAACAAAGATGTTGAGCCTGCATGGGACGGTGCTCCTCACTTGAACATTAATCTTCAAATGAATTATTGGCCGTCCCTTTCTTGCAACCTTCATGAGTGTCAAGAGCCATTATTTGATTACATTTCCTCTTTGTCAGTCAGTGGTAGTAAAACTGCAAAGGTGAACTATGAAGCAAATGGTTGGGTTGCACATCAAGTTTCTGACATATGGGCTAAAACATCACCAGATCGAGGTGAAGCAGTTTGGGCTTTATGGCCAATGGGTGGAGCTTGGCTTTGTACCCATCTATGGGAGCATTATACTTATACAATGGACAAAGATTTTCTTAAAAATAAAGCATATCCTTTGTTGGAAGGATGTACATCATTTTTGCTGGATTGGTTGATTGAAGGCCGTGGTGGATTATTGGAAACTAACCCATCAACTTCACCAGAGCACATGTTCACTGCACCAGATCAAAAGCCTGCTAGTGTGAGCTACTCATCAACCATGGACATTTCCATCATAAAAGAAGTTTTCTCTATAATCATTTCTGCTGCTGAGGTTTTGGGAAGACAAGATGATGCTATTATCAAAAGAGTCACTGAGTCTCAGACTAAGCTTCCTCCGACAAAAATTGCTAGGGATGGTACCATTATGGAATGGGCAGAAGATTTTCAGGACCCAGATATACATCATCGACATGTTTCACATCTGTTTGGCCTGTTTCCGGGGCACACAATAAGTCTCGAGAAAACTCCAGATCTCTGTAAAGCTGTGGATAATAGTCTAATCAAAAGAGGAGATGAAGGTCCAGGGTGGTCAACAACTTGGAAAGCAGCATTGTGGGCACATCTTCACAACAAGGAACACGCATATCGCATGATAAAACACTTGATTATCTTGGTGGACCCTGATCATGAAAGTCTTTACGAAGGAGGACTTTACAGTAATTTGTTCACAGCACATCCCCCTTTCCAGATTGATGCAAACTTCGGTTTTTCAGCAGCAATTGCAGAAATGCTTGTTCAAAGCACAACGAAGGACCTCTATTTGCTTCCTGCATTGCCTAGGGATAAATGGGCAAATGGTTGTGTGAAGGGATTAAAAGCACGTGGCGGAGTGACAGTCAACATTTGCTGGAAAGAAGGAGATCTGCATGAAGTTGGACTTTGGTCACAAAACCAGAATTCCCAACTGAGACTGCATTATGGAGGAACCATGGATAGGGGTGGTATCGATGCAGGGGCAACTACTTCTTCTCGCCAATACTACCATCCCCGTTTTAGATACCTAGGGTACTGCTTGTCTAGTCCCCGAAGAAAATGCCCGGAAAGTGTGGGTCGTCATGACTTAAATGCATGTCCATTTCAAAGCAAAGTCAGCTACTTCATTCACCAACATCCATCAGCTTCTTCCTTAGCTCCACCAACTCCTGAAATCTCTTCTCTACTCTCTTCCTCATTCATTATATTTTCTTCAATGGAAGATGGAGAATGGGTTCTGGTGCATGGCCCCCCACAGAAGGACTGGTGGAACCCAAGTTTAACTAATGCAGAGGATGAACCTTCCAGACCCTTGAAGGTTACTTTTTCTGGGCCTGCTCCACACTGGACCGATGCCATCCCCATAGGAAATGGCCGTCTTGGTGCCATGGTTTGGGGTGGTGTACCATCAGAAGTTCTCCAGCTCAATGAGGACACACTTTGGACTGGGACGCCTAGCAACTACACCGACAAAAATGCTCCTGAAGCACTGGCTGAAGTCCGAAAACTTGTTGATGATAGAAAATACTCTGAAGCTACGGCTGCAGCTGTCAAGTTGTCAGGAGATCCTTCTGATGTATACCAACTTCTCGGTGATATCAAATTAGAATTTGATGATTCTCATCTTAAATATTCAAAAGAGTCTTATCTCAGGGAGCTGGATTTGGATACTGCAACAGCAAAAATAAAATACTCTGTGGGTGATGTAGAATTTACCAGAGAACATTTTGCTTCTAATCCAGACCAAGTGATAGTAACAAGGTTTTACGCAAGCAAGTCAGAGTCATTATCATTTACAGTGTCTTTGGATAGTAAATTACATTACACTTCACGGGTAAGTGGCCAAAATCAGATAATAATGGAAGGAAGCTGTCCTGGCAGAAGGATCAGGCCAAAAGTGAATTCAAGTGACAATCCAAAGGGAATTCAGTTTTCTGCAGTTCTTGATATACAGACTAGTAATGACAAAGGGGTTATACATGTTTTGGATGATAAGAAGCTAAGGGTTGAAGGTGCAGATTGGGCTATTTTGCTTCTGACAGCTGCTTCTTCTTTTGATGGGCCATTTACTAAGCCTGAAGACTCTAAGAAGGATCCTACTTCTGAGTCCCTCAGTAAAATGAAGTCTGCAAAAAGTTTTTCATATACTGATCTTTATGCACGTCACTTGGATGACTATCAGAATCTATTTCATCGGGTCTCATTGCAACTCTCTAAAAGCTCCAAGACTGTTTTGGGAAAATCTGTTTTGGATGAAAGGAAATCGGTTTCCTCTCAAACTAACATATCTCCAATGGGAGGTGGTGATACCATTCCAACTTCAGCGAGAGTCAAATCATTTCAAACCGATGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGTCGATATCTTCTAATTTATTGTTCACGTCCTGGAACTCAGGTGGCAAACCTACAGGGTATATGGAACAAAGATCTTGAGCCTAAATGGGATGGTGCTCCTCACTTGAACATTAATCTTCAAATGAATTATTGGCCATCCCTACCTTGCAACCTACATGAGTGTCAAGAGCCATTATTTGATCACATTTCCTTTTTGTCAGTCAATGGCAGTAAAACTGCAAAGGTGAACTATGAAGCAAATGGTTGGGTTGCACATCATGTTTCTGACATATGGGCTAAAACATCCCCATATCAAGGTAACCCTGTTTGGGCTTTATGGCCAATGGGTGGAGCTTGGCTTTGTATGCATCTATGGGAGCATTATACTTATACAATGGACAAAGATTTTCTTAAAAATAAAGCTTATCCTTTGTTGGAAGGATGTACATCATTTTTGTTGGATTGGTTGATTGAAGGCCGTGGTGGATTATTGGAAACTAACCCATCAACTTCACCAGAGCACATGTTCATTGCACCAGATCAAAAGCCTGCTAGTGTGAGCTACTCATCAACCATGGACATTTCAATCATAAAAGAAGTTTTCTCTACAATCATTTCTGCTGCTGAGGTTTTGGGAAGGCAAGATGATGCTATTATCAAAAGAGTCAGAGAGTCTCAGCCTAAGCTTCCTCTGACAAAAATTGCTAGGGATGGTTCCATTATGGAATGGGCAGAAGATTTTGAGGACCCAGATATACATCATCGACATGTTTCACATCTGTTTGGCCTGTTTCCAGGGCACACAATAAGTCTTGAGAAAACTCCTGACCTCTGTAAAGCTGTGGATTATAGTCTAATTAAAAGAGGGGATGAAGGTCCAGGATGGTCAATAACTTGGAAAGCAGCATTATGGGCACATCTTCGCAACAGTGAACATGCATATCGCCTGATAAAACACTTGATTAACCTGGTGGACCCTGATCATGAACGTCATTTCCAAGGAGGACTTTACAGTAATTTGTTCACAGCACATCCCCCTTTCCAGATCGATGCAAACTTTGGTTTTTCAGCAGCAATTGCAGAAATGCTTGTTCAAAGCACAACAAAGGACCTCTATTTGCTTCCTGCACTGCCTCGGGATAAATGGACAAATGGTTGTGTGAAGGGATTAAAAGCACGTGGTGGGGTGACAGTGAACATCTGCTGGGAAGAGGGAGATTTGCATGAAGTTGGCCTTTGGTCACAAAACCAGAATTCCCAACTGAGACTGCATTATAGAGGAACCATAGGAGTAGCAAATTTATCACCCGGCAGAGTTTACTCATATAATAACCGGTTGGAATGTGTAAAGACATACTCCCTTAGTGAAGTGAGTCCTTGA 5229 0.4215 MEDGDWVLVRGPPQKDWWNPSLTNVEDEPPRPLKVTFSGPATHWTDAIPIGNGRLGAMVWGGVPSEVLQLNVDTLWTGIPGNYTNKNAPEALAKVRKLVDDRKYSEATAAAVKLSGDPSDVYQLLGDIKLEFDDSHLKYSKESYLRELDLDTATAKIKYSVGDVEFTREHFASNPDQVMVTRFSASKSGSLSFTVSLDSKLHYTSRVSGQNQIMMEGSCPGSRIRPKVSSSDNPKGIQFSAVLDIQISNDKGVIHVLDDKKLRVEGSDWAILLLTAASSFDGPFTKPEDSKKDPTSESLSKMKSAKSFSYTNLYARHLDDYQNLFHRVSLQLSKSSKTVLGKSVLDERKSVSSQTNISPMGGGDTIPTSARVKSFQTDEDPSFVELLFQYGRYLLISCSRPGTQVANLQGIWNKDVEPAWDGAPHLNINLQMNYWPSLSCNLHECQEPLFDYISSLSVSGSKTAKVNYEANGWVAHQVSDIWAKTSPDRGEAVWALWPMGGAWLCTHLWEHYTYTMDKDFLKNKAYPLLEGCTSFLLDWLIEGRGGLLETNPSTSPEHMFTAPDQKPASVSYSSTMDISIIKEVFSIIISAAEVLGRQDDAIIKRVTESQTKLPPTKIARDGTIMEWAEDFQDPDIHHRHVSHLFGLFPGHTISLEKTPDLCKAVDNSLIKRGDEGPGWSTTWKAALWAHLHNKEHAYRMIKHLIILVDPDHESLYEGGLYSNLFTAHPPFQIDANFGFSAAIAEMLVQSTTKDLYLLPALPRDKWANGCVKGLKARGGVTVNICWKEGDLHEVGLWSQNQNSQLRLHYGGTMDRGGIDAGATTSSRQYYHPRFRYLGYCLSSPRRKCPESVGRHDLNACPFQSKVSYFIHQHPSASSLAPPTPEISSLLSSSFIIFSSMEDGEWVLVHGPPQKDWWNPSLTNAEDEPSRPLKVTFSGPAPHWTDAIPIGNGRLGAMVWGGVPSEVLQLNEDTLWTGTPSNYTDKNAPEALAEVRKLVDDRKYSEATAAAVKLSGDPSDVYQLLGDIKLEFDDSHLKYSKESYLRELDLDTATAKIKYSVGDVEFTREHFASNPDQVIVTRFYASKSESLSFTVSLDSKLHYTSRVSGQNQIIMEGSCPGRRIRPKVNSSDNPKGIQFSAVLDIQTSNDKGVIHVLDDKKLRVEGADWAILLLTAASSFDGPFTKPEDSKKDPTSESLSKMKSAKSFSYTDLYARHLDDYQNLFHRVSLQLSKSSKTVLGKSVLDERKSVSSQTNISPMGGGDTIPTSARVKSFQTDEDPSFVELLFQYGRYLLIYCSRPGTQVANLQGIWNKDLEPKWDGAPHLNINLQMNYWPSLPCNLHECQEPLFDHISFLSVNGSKTAKVNYEANGWVAHHVSDIWAKTSPYQGNPVWALWPMGGAWLCMHLWEHYTYTMDKDFLKNKAYPLLEGCTSFLLDWLIEGRGGLLETNPSTSPEHMFIAPDQKPASVSYSSTMDISIIKEVFSTIISAAEVLGRQDDAIIKRVRESQPKLPLTKIARDGSIMEWAEDFEDPDIHHRHVSHLFGLFPGHTISLEKTPDLCKAVDYSLIKRGDEGPGWSITWKAALWAHLRNSEHAYRLIKHLINLVDPDHERHFQGGLYSNLFTAHPPFQIDANFGFSAAIAEMLVQSTTKDLYLLPALPRDKWTNGCVKGLKARGGVTVNICWEEGDLHEVGLWSQNQNSQLRLHYRGTIGVANLSPGRVYSYNNRLECVKTYSLSEVSP* 1743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03111 1742 FunFam Alpha-L-fucosidase 2 1166 1646 - -
Rops6g03111 1742 Gene3D - 270 747 IPR012341 GO:0005975
Rops6g03111 1742 Gene3D - 1169 1646 IPR012341 GO:0005975
Rops6g03111 1742 Pfam Glycosyl hydrolase family 65, N-terminal domain 936 1181 IPR027414 -
Rops6g03111 1742 Pfam Glycosyl hydrolase family 65, N-terminal domain 37 282 IPR027414 -
Rops6g03111 1742 PANTHER ALPHA-L-FUCOSIDASE 2 920 1735 - -
Rops6g03111 1742 SUPERFAMILY Six-hairpin glycosidases 1191 1695 IPR008928 GO:0005975
Rops6g03111 1742 FunFam Alpha-L-fucosidase 2 267 747 - -
Rops6g03111 1742 SUPERFAMILY Six-hairpin glycosidases 292 796 IPR008928 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03111 K15923 - gmx:100810387 1466.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03111 6 54478718 54497011 Rops6g03111 6 54478718 54497011 ECH