Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03094 ATGGCTATCGACATCCAAACCTTGGAAGACAGGTATATTGATTCTTGCAGGAGACATGGTGTTTTGCCTAACACTACTATTTTGTCAAGCTTTTTCAAGGCTGAGGTCAAAAAATCTCGCCAAGGGCTGTGCATCCTGGAAATTTTAATTGATGACCTTAGGGATATTGATGTTGGTCCACTTCTTGACATATGCACGAACCTTGATACTTCTGAAATAGAAGCTGTTGATGTACGTAATGAATCATCATGTGTATTAAACGGAGAATATGCATTATCATTGATGCGTGCTATTAATCAAAAGCTTCGAGTAGTCGAACTACAAGATGTGTCATTTGGAAAAGACTTCTTACGGGATATCTCACAAAGAGGTTTGGCATGCCAAGTTTTGACATTGAGGTCTTCGCGTTTCCGGAAGCTGAACTTGATGGGGGAGTTCATGCACATGCACACACTTAATCTTGATTTCAGTTCTTCCCTTACCAGTTTCCAGGAGGACTGTTTTAATTGCATGCCCAATCTGATGTGTCTATCAATGTGTGAAACACGGATTACAAATCTTTGGACAACTGTTGCAGCTCTCTCTAAGCTTCCTTCTTTGGTTGAACTAAGGTTTCAATATTGGCAATACTGCAATGATGCTGGGACATCTTTTAATTCATCCAGTGGGAAGTCAGACGGCACTGCTGATTTTAGTCTGCTTGACAAAGTTCCTTTTATTGGTGAATCCTGCACTGATACAAGGGAACTGACGGATCCCAACTTTAGTGCCGAAGATCCACAGAGAAATTTTTATTCCTTTGATGAAGAAGTTGTAAATTATGATGTTCAAAGCGTGGTTGAGGATTCATCGGATGATAATGAAATTGACTTTACTAGTCATCATCATAGATACTGGTTGTCAGATGTTTTTCCTGGGTGGAATCTACAAGTTCCTCTTCAGAATGAGTTCACATTACCGAATGAAGATGGAGAAGATTCATTGCAAGGTTCCTTTACAGGGCATACTGCTGATGTTTCTATGAAGTATATGTCTCGTCATGCATCACCAATATGTCATGAGAAACATTACAGAGAATTCATGATAGCTTCATTACCAAATCTGAAAAATTTAGATAATTTGCCCATCAGAAAGATTGACAAGGAAAGCGCTACCGGAATATTTTCTCAATGCTTTGAATATCTTCCATACAGATGGAAGCACAAAGAGAGTGTTGTACGTATCTTACAGAAGCGAGAAATAAGATCAAGCCACATTAAGGTGCAATCTTCTCAGCGTAGTCCATCATATCCTTCTGGAATGTCCCAATATTTTTATACCAGGTCTCTTTCTGCTGCTAAGTTGGGGTCTTCAACTTGGCCTTTCTTGCATCCCCTTTCTCTATCAGGATGTGAATCGAATAAGGGCTTTCGTCCAAGGCAGTTTGAGTACCACCCATCTGACTCCAGCTTGATGGTCTTTGGAACTTTAGATGGTGAAGTGGTTGTCATTAATCATGAGAGTGAACATATTGTGAGTTATATCCCATCACTTGGAGCAATGAATAGTGTCTTGGGTCTCTGTTGGCTCAAGAAATATCCCTCTAAGCTTATAGCAGGTTCAGACAATGGTTCCTTGAAATTGTATGACATCCACCAGATACCAAGAAAAACTACTGGCATATATGGGAATTCTGGTTGTATTACCTTTGATGAATTTGATCAGTTGACATCTGTTCATGTTAACTCTACGGATGAACTATTTCTTGCAAGTGGTTACTCGAGAGATGTTGCTTTGTATGACATCAACTGTGGAAAACGCTTACAAGTGTTCACAGATATGCATCGTGGGCATATTAATGTAGTCAAGTTTGCAAATCATTCTCCGTCAATTTTTGCCACTTCATCATTTGATCAGGATGTCAAAATGTGGGACTTGAGACAGAAACCAATACACCCTTGCTTCACTGCTTCAAGCTCTAGAGGAAATGTGATGGTTTGCTTTTCTCCAGATGATCAATATATTCTTGCATCAGCAGTTGATAATGAGGTTAGACAATTTCTGGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCCACTGAAAGTTCTCAAAATTACACCCGTTCTTATTACATGAATGGGAGGGACTACATTATAAGTGGGAGTTGTGATGAACATGTGGTCCGTATTTGTTGTGCTCAAACAGGGAGGCGTCTGAAAGATATTTCCCTTGAGGGAAAAAGCTTAGGAAGCTCCATGTTTGTTCAGTCTTTGAGGGGTGATCCTTTCAGGGATTTCAATATGAGCGTGTTAGCAGCCTACATGCGGCCAGGCTCCAAGTCTGAAATTGTCAAGGTCAACTTACTAGCATCTAGTGGCCAAGCTAAGGATGATTCTGATGAGCAGCGCCCTTGCCTGTTCCATAGCATGGGAGCTTGA 2427 0.4042 MAIDIQTLEDRYIDSCRRHGVLPNTTILSSFFKAEVKKSRQGLCILEILIDDLRDIDVGPLLDICTNLDTSEIEAVDVRNESSCVLNGEYALSLMRAINQKLRVVELQDVSFGKDFLRDISQRGLACQVLTLRSSRFRKLNLMGEFMHMHTLNLDFSSSLTSFQEDCFNCMPNLMCLSMCETRITNLWTTVAALSKLPSLVELRFQYWQYCNDAGTSFNSSSGKSDGTADFSLLDKVPFIGESCTDTRELTDPNFSAEDPQRNFYSFDEEVVNYDVQSVVEDSSDDNEIDFTSHHHRYWLSDVFPGWNLQVPLQNEFTLPNEDGEDSLQGSFTGHTADVSMKYMSRHASPICHEKHYREFMIASLPNLKNLDNLPIRKIDKESATGIFSQCFEYLPYRWKHKESVVRILQKREIRSSHIKVQSSQRSPSYPSGMSQYFYTRSLSAAKLGSSTWPFLHPLSLSGCESNKGFRPRQFEYHPSDSSLMVFGTLDGEVVVINHESEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHQIPRKTTGIYGNSGCITFDEFDQLTSVHVNSTDELFLASGYSRDVALYDINCGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKPIHPCFTASSSRGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHVVRICCAQTGRRLKDISLEGKSLGSSMFVQSLRGDPFRDFNMSVLAAYMRPGSKSEIVKVNLLASSGQAKDDSDEQRPCLFHSMGA* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03094 808 Gene3D Ribonuclease Inhibitor 91 227 IPR032675 -
Rops6g03094 808 SUPERFAMILY WD40 repeat-like 470 738 IPR036322 GO:0005515
Rops6g03094 808 ProSiteProfiles Trp-Asp (WD) repeats profile. 605 640 IPR001680 GO:0005515
Rops6g03094 808 SMART WD40_4 643 681 IPR001680 GO:0005515
Rops6g03094 808 SMART WD40_4 597 638 IPR001680 GO:0005515
Rops6g03094 808 SMART WD40_4 501 543 IPR001680 GO:0005515
Rops6g03094 808 SMART WD40_4 556 594 IPR001680 GO:0005515
Rops6g03094 808 Gene3D - 467 756 IPR015943 GO:0005515
Rops6g03094 808 PANTHER BNAC09G30780D PROTEIN 2 807 IPR046377 GO:0071493|GO:0080008
Rops6g03094 808 SMART LRRcap_2 354 372 IPR003603 -
Rops6g03094 808 SUPERFAMILY L domain-like 126 214 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03094 - - gmx:100806443 1401.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03094 6 54125989 54132198 Rops6g03094 6 54125989 54132198 ECH