Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03084 ATGGCACCTTTCATTTTCCTCTCTCTGTTATTTCTCTTTCTCCAATATCCCCTCTTATCCCTCTCATCCAACTCTGAAGGGAATGCTCTGCATGCTTTGAGAAGCAGGCTTTCTGACCCTAACAACGTGCTGCAAAGCTGGGACCCTACCCTGGTTAATCCTTGTACTTGGTTCCATATTACCTGTGACTCCAACAATCATGTGATTCGCTTGGACTTGGGCAATTCTAACGTTTCTGGAACTTTGGGCCCGGAACTTGGCCAGCTACATCATCTGCAGTACCTAGAACTCTATAGCAATGACTTGAGAGGAAAGATTCCTGAGGAACTTGGTAAATTGAAAAAGCTCATTAGCATGGATTTGTATGGTAACAAGTTTGAGGGGCAAATCCCAAAGTCATTTGGCAAGTTGAAATCTCTAAAATTCCTGAGGCTAAACAACAACGAGTTGACAGGATCAATCCCAAGAGAACTCACTGGTCTCACTGATCTCGAAATCTTTGATGTTTCTAATAATGACCTCTGTGGAACAATACCAGTAGATGGCAACTTTGGATCTTTCCCAATGGAAAGTTTTGAACACAACAGATTTAGTGGACCCGAGCTGAAAGGACTTGTTCCATACGATTTTGGATGCTGA 639 0.4288 MAPFIFLSLLFLFLQYPLLSLSSNSEGNALHALRSRLSDPNNVLQSWDPTLVNPCTWFHITCDSNNHVIRLDLGNSNVSGTLGPELGQLHHLQYLELYSNDLRGKIPEELGKLKKLISMDLYGNKFEGQIPKSFGKLKSLKFLRLNNNELTGSIPRELTGLTDLEIFDVSNNDLCGTIPVDGNFGSFPMESFEHNRFSGPELKGLVPYDFGC* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03084 212 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 189 - -
Rops6g03084 212 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Rops6g03084 212 Gene3D Ribonuclease Inhibitor 22 203 IPR032675 -
Rops6g03084 212 FunFam Somatic embryogenesis receptor kinase 1 22 207 - -
Rops6g03084 212 SUPERFAMILY L domain-like 23 200 - -
Rops6g03084 212 Pfam Leucine rich repeat 119 174 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03084 Rops-Chr6 53969082 53971545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g03084 4 195 Receptor kinase-like Gene Family AT1G71830 60.417 1.37e-71 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03084 - - gmx:100306422 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03084 6 53969082 53971545 Rops6g03084 6 53969082 53971545 ECH