Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03082 ATGACGGTTCCCAAACGAAGCTATACTCGAATTGACACTTTGGAGCTTAAAGCTCTGTTTGTTCGGAAGGTTGGTCATCAGAGGGCTGATAAGTACTTTGATCAGCTTGGAAGATTATTAAGTTTAAAGATTAGCAAGTCTGAGTTTGACAAGATTTGCATAAAGACGATTGGGAGGGAAAATATCCCTCTCCACAATCAACTCATCAGAGCAATTCTCAAGAATGCCTCTCTGTCTAAAGTCCCTCCTCCAAGAGGCTCTGCGAGAATAGGGAGTACCTTAAGTGCAAAAGATTCAAACGGGCAGCAGAGCAGCACTATTCAGTTGCAGTATGGGGATGCATTTCCTCCTTCAATGCGGAGGGGTGGCTCTTTGGCTACCCGAGATCGTAAGATTAAGGGCCGCCAAATTGCATTGGGGCCACTCGGCAAGCCCCAAAGTCTTGCATCTGAAGAATTGATCTCTAAGACCCATGAGCAGCAGAGTGCAACAGAACTGAATTCCCTTGGCAGTAGACCTCCAATTTCCGTTGAAGAAGGAGAAGAGGTTGAACAGATGGCTGGAAGCCCCAGCATCCAAAGTAGGAGTCCAGTTACAGCTCCCCTTGGTATATCCATGAATTTTGGTTGCGGACGCAGATTTCTTTCTAATGTATCATTATGTAGCAAATATTATCCAGAGACCTGTCAAAGCAACGGAGATCTTCCTGACACAAGATCTTTGAGGAGTCGTTTGGAGCAAAAGTTGGAGAAGGAGGGTTTAACTGTGACAGTGGATTGTGTAAATCTATTGAATAATGCACTGGATTCATATCTGAAGAGATTGATTGAATCCTCAATGGGTTTAGCTCGGTCAAGATTCGGAAATGAGCACCAAAGACAACGAAATGGGCTGTCAGTAACTGGTTCAAATGCATTGCTACCTGGAAGATATATGCAAACAGCAACACAAAATGCTGGAGCATCTGTCTTAGATTTTCGTCTTGCAATGGAATTAAACCCACAAGTTCTTGGACCAGATTGGCCCATACAGCTTGAGAAGATTTGCATACGTGCTTCTGAAGAATGA 1068 0.4401 MTVPKRSYTRIDTLELKALFVRKVGHQRADKYFDQLGRLLSLKISKSEFDKICIKTIGRENIPLHNQLIRAILKNASLSKVPPPRGSARIGSTLSAKDSNGQQSSTIQLQYGDAFPPSMRRGGSLATRDRKIKGRQIALGPLGKPQSLASEELISKTHEQQSATELNSLGSRPPISVEEGEEVEQMAGSPSIQSRSPVTAPLGISMNFGCGRRFLSNVSLCSKYYPETCQSNGDLPDTRSLRSRLEQKLEKEGLTVTVDCVNLLNNALDSYLKRLIESSMGLARSRFGNEHQRQRNGLSVTGSNALLPGRYMQTATQNAGASVLDFRLAMELNPQVLGPDWPIQLEKICIRASEE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03082 355 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 282 IPR024738 GO:0070461
Rops6g03082 355 MobiDBLite consensus disorder prediction 80 103 - -
Rops6g03082 355 MobiDBLite consensus disorder prediction 156 171 - -
Rops6g03082 355 MobiDBLite consensus disorder prediction 156 195 - -
Rops6g03082 355 PANTHER TRANSCRIPTIONAL ADAPTER 1 4 354 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03082 Rops-Chr6 53957848 53959903 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03082 - - gmx:100817344 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03082 6 53957848 53959903 Rops6g03082 6 53957848 53959903 ECH