Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03074 ATGGTGGTCTGCAAATGTCGCAAGGCTACTAAGTTATATTGCTTCGTGCACAAAGTTCCTGTCTGCGGAGAATGTATCTGTTTCCCGGAGCACCAAATCTGCGTGGTCCGGACATATTCAGAATGGGTTATAGATGGGGAGTACGATTGGCCTCCTAAATGCTGCCAATGCCAAGCTGTTTTAGAGGAGGGGGATGGATCTCAAACTACTCGACTGGGTTGCTTGCATGTCATCCACACAAATTGCTTGGTCTCGCATATCAAGAGTTTTCCTCCACATACTGCCCCAGCAGGATATGCGTGTCCTTTGTGTTCCACTTCGATATGGCCTCCCAAAAGCGTGAAAGATTCAGGATCTCGTCTTCATTCCAAGTTGAAGGAAGCTATCATGCAGACTGGTATGGAAAAGAATGTCTTTGGAAATCATCCAGTTACATTGTCAGTGACAGAATCTCGTAGTCCTCCACCTGCTTTTGCTTCAGATCCATTGATTAGTGGGGAAAATCACGGAAACTTGGACTCAGTAGATGGATACTCACCTGCAACTGGGTCAGAACCTTCTAAACTTTCAGTGACAGATATTGTGGAGATAGATGGTGCTAATTCAGCGGGAAATTTCATGAAAGGCTCAAGTCCTGTTGCTCCTGGTGCGACTACAAGGAAGGGCTCAATCCATGTTGAACGACAGAACTCTGAAATCTCATACTTTGCTGATGATGAAGATGGGAATCGTAAAAAGTATACAAAAAGAGGTCCATTCCACCATAAGTTCCTTAGAGCATTGCTTCCTTTCTGGTCTAGTGCTTTACCTACTCTACCAGTGACTGCACCTCCAAGGAAAGACGGATCAAATGCAACTGAAGCCTCTGAAGGTCGTACGCGGCATCAAAGATCATCAAGGATGGACCCCAGAAAAATTCTTCTCCTGATTGCAATCATGGCTTGCATGGCAACTATGGGTATATTGTATTACAGACTGGTGCAAAGGGGTCCAGGGGAAGAGCTTCTTAATGATGAACAAATTTAG 1026 0.4503 MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVVRTYSEWVIDGEYDWPPKCCQCQAVLEEGDGSQTTRLGCLHVIHTNCLVSHIKSFPPHTAPAGYACPLCSTSIWPPKSVKDSGSRLHSKLKEAIMQTGMEKNVFGNHPVTLSVTESRSPPPAFASDPLISGENHGNLDSVDGYSPATGSEPSKLSVTDIVEIDGANSAGNFMKGSSPVAPGATTRKGSIHVERQNSEISYFADDEDGNRKKYTKRGPFHHKFLRALLPFWSSALPTLPVTAPPRKDGSNATEASEGRTRHQRSSRMDPRKILLLIAIMACMATMGILYYRLVQRGPGEELLNDEQI* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03074 341 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 143 IPR013083 -
Rops6g03074 341 PANTHER ZINC FINGER PROTEIN-LIKE 1 1 333 IPR039043 -
Rops6g03074 341 SUPERFAMILY RING/U-box 37 116 - -
Rops6g03074 341 MobiDBLite consensus disorder prediction 202 223 - -
Rops6g03074 341 MobiDBLite consensus disorder prediction 149 189 - -
Rops6g03074 341 MobiDBLite consensus disorder prediction 273 300 - -
Rops6g03074 341 MobiDBLite consensus disorder prediction 175 189 - -
Rops6g03074 341 MobiDBLite consensus disorder prediction 285 300 - -
Rops6g03074 341 ProSiteProfiles Zinc finger RING-type profile. 54 105 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03074 - - gmx:100805734 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03074 6 53895421 53900107 Rops6g03074 6 53895421 53900107 ECH