Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03029 ATGAAGCTGAGACTCAGATCTATAGAATCCAAAGAAACCCTAAAAATCGAAGTTCCCAATTCATGTTCTTTGCAACAACTAAAAGATACCATCTCTCGTGCCATCTCTTGTTCTTCTTCTTCTTCCCTTCTTCTCTCCCTCAACAGGAAGGACGAAATCCACGCCTCCTCGCCGGACGAGTCCCTCCACTCCATCGGCATAGCCGGCGGCGACCTCATCTTCTACACCCTCAACCCCAACACCTTCTCCACCGAAACCCTCCCTCACAAACCCACCCCACAAGAAGAATCAGATTCCGGCGAACGACCCATTATTCAAAACTCGCCGGAAAAAGACGTGGCCGGTGCTCCGTCGATTCCTGCTGCAGAAAAGTCTCCGACTTTGGATGCTGCAGAAGCGGAAGCTATGGAAATGGTTGGTGGGTCTGATGAGGCGGTGGTGGGGAGGACCAATTCAGAGCCTTTGTTTGTGAAAAGGGTTCTAAGAGAAGCACTTGGTAATGATGTTAGCGATTTCAAGCTATTAGTCTTCTCTGTTCATGCTGTCATTCTAGAATCTGGGTTTGTTCGTGCGGATCAGGTTTCGGGTATGGCGGTTAGTTGTTCTCATATTCTTGATGATTGGCCTTCAGCTTCATCTTCTACGATATCTTTTAGGTATACCCTTCCTGAGATTCTGACTAATGGTTCCTCTCAAACTGTGAATTTGAAAATTATGACCTTAGGGAATCTTGTGAATGTTTGTGGGTCATTGTCTGATGATGCTAGCTCTAGGTTGCATAGTGTTTATTTGGATAAAAGTAAATTTGCCAAGCCTCTAGAGTTGATGCTGGCAAATTCTGAATCTAAGGCTAGTTTCAATGATGGGGGAGATGGAAATGAGGTTTTTGAATTGTGGAAGATAGTGAAAGATAGGCTTGCATTGCCACTCTTAATTGATCTTTGTGAGAAGGCGGGATTGGATCTTCCTCCTTGTTTTATGCGCTTACCAATGGAACTTAAACTCATGATTTTGGAGTACCTTCCTGGTGTTGATTTGGCCAAAGTGGCTTGCTCTTGTTCAGAATTGCGATATTTGGCTTACAAAAATGAGTTGTGGAAGAAGAAGTTTGAGGAAGAGTTCGGACGATGGGCGAGTGAAGCAAAGTTTTTTAAGGAGTTGTTTGCTATGTACTGGGTAACAAAGAAGAAATCAGAGCAACGGCTTCCACTTAGGCCTGGTATTGCAAGATACTTCCCAAGGAGAAGAGACCCCAATCGTTTTGGAATGCCTCCAATTTGGGGTGGAGGATATGATCTGCAGCCAGGCTTTGGTGTACCACTCCCTGGACACCCACCAAGGCGGATCTTCCATCCCCGATGTCATCTGGGAGAGTTCAATCAATAA 1386 0.4531 MKLRLRSIESKETLKIEVPNSCSLQQLKDTISRAISCSSSSSLLLSLNRKDEIHASSPDESLHSIGIAGGDLIFYTLNPNTFSTETLPHKPTPQEESDSGERPIIQNSPEKDVAGAPSIPAAEKSPTLDAAEAEAMEMVGGSDEAVVGRTNSEPLFVKRVLREALGNDVSDFKLLVFSVHAVILESGFVRADQVSGMAVSCSHILDDWPSASSSTISFRYTLPEILTNGSSQTVNLKIMTLGNLVNVCGSLSDDASSRLHSVYLDKSKFAKPLELMLANSESKASFNDGGDGNEVFELWKIVKDRLALPLLIDLCEKAGLDLPPCFMRLPMELKLMILEYLPGVDLAKVACSCSELRYLAYKNELWKKKFEEEFGRWASEAKFFKELFAMYWVTKKKSEQRLPLRPGIARYFPRRRDPNRFGMPPIWGGGYDLQPGFGVPLPGHPPRRIFHPRCHLGEFNQ* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03029 461 Gene3D - 1 77 - -
Rops6g03029 461 SUPERFAMILY Ubiquitin-like 1 74 IPR029071 -
Rops6g03029 461 CDD F-box_AtSKIP22-like 325 370 - -
Rops6g03029 461 Gene3D - 326 400 - -
Rops6g03029 461 SUPERFAMILY F-box domain 323 383 IPR036047 GO:0005515
Rops6g03029 461 ProSiteProfiles F-box domain profile. 323 369 IPR001810 GO:0005515
Rops6g03029 461 Gene3D - 153 325 - -
Rops6g03029 461 PANTHER F-BOX PROTEIN SKIP22 1 459 - -
Rops6g03029 461 Pfam F-box-like 328 368 IPR001810 GO:0005515
Rops6g03029 461 MobiDBLite consensus disorder prediction 84 125 - -
Rops6g03029 461 SMART fbox_2 329 369 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03029 K10293 - gmx:100796338 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03029 6 53341238 53343063 Rops6g03029 6 53341238 53343063 ECH