Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g03022 ATGGTTTTGAAGTCAATGGCTGTTTCAGCAAGCGATCTAAGCCTTTTGAGGCAATATAGCGTTGCTAAAAACCCTCAAGTTGATTTAAAGAATCGATTTTTTGTTGGCAGAGTTATGAATCTTGGGTTTTGTTGCAAGGGAGAGAAATGGAAGGGAAATTCAGGGTTTAAGGTTCGTGCAGCTGTGGAAATGGGTGTGGAGGGAACAAAGAGTAAGGCATTGGAGGGAACTTTTGGGTTGGATGTGTTTTCAGAAGGAGCGTTAATGGTGAAAGGGTTTAGGGGTTTGAGGAAGACAAAGCTTGTGTGCACTGTTGGTCCTGCATGTAGTTCATTGGAAGATCTAGAGAAGTTGGCACTTGGAGGAATGAATGTTGCAAGGCTCAACATGTGTCATGGTACTAGGGAGTGGCACCGTGATGTGATTAGGAAGATTAAGAAGTTGAATGAGGAAAAAGGTTTCTCTGTTTCTGTGATGATTGACACTGAAGGTAGCCAGATTCAATGTGTTGATCATGGTGCTGCTTCCTCGGTTAAAGTAGAGGAAGATTCGATTTGGCGGTTTACTGCTGAACATTTTGAGGGTTCTCGTCCATTCACTGTTCAAGCAAACTATAGAGGTTTTTCTGAAGGTATTGAAGTGGGTGATGAACTTGTTATTGATGGTGGAATGGCATGCTTTGTAGTCACTGAGAAGACTGGAAATGATTTGCATTGTAAGTGCACAGATGCTGGTCTTTTCCTACCTGGAGCCAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTGAGGAGGAATTATGAACTCCCAACTCTATCAAAAAAGGATTGGGCTGACATTGACTTTGGTATAGCTGAGGCTGTTGATTTTTTTGCCTTATCCTTTGTCAATCATGCTGATTCTATTAAGGATCTAAAGAACTACCTCTCTGCCAAATCAACCAAATCCATAAAAGTATTGGCAAAGATAGAAAGCTTAGAATCCCTTCACAATCTGAAGGAAATAGTGCAAGCTTCTGATGGAATCATGGTGGCTCGTGGTGACCTTGGTGTCGAAATACCACTTGAACAGATTCCTACCGTCCAAGAGGATATAATCTACATTTGCAGACAACTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTTGAGTATCCAACACCAACACGTGCTGAGGTAGCAGATGTTTCTGAAGCAGTTCGACAGTATGCCGATGCTTTGATGTTGTCTGGTGAGTCAGCTATTGGATCATTTGGACAGAAAGCTTTGGCAGTCTTGGATATGGCTAGCAGTAGAATGGAATCATGGAGTAGGGAGGAAAACAGACAAAGTCTTCTCAATCACCATCAACTTGGAGTATCATTGCCAGATTGCATCACTGAGCAAATATGCAATTGTGCTGTTGAAATGGCTAACAATCTAGGTGTGGATGCCATCTTTGTATACACAAAACATGGATACATGGCATCACTGCTATCACGCAATCGTCCAAATCCTCCTATCTTTGCTTTCACCAATGATGAAAGTACCCGGCTGGCTCTGAATTTGCAATGGGGTGTTGTACCCCTTCTTGTTGATTTGTCAGAAGATGCTGAATCTAACATCTCAAAATCTGTTCAGCTTATGAAATCTAAAGAACTGATCAGCCAAGGGGATGTTGTTCTAGTGGTCTCAGATGTTGCTCCAACACCAACTCACATGGCTTTCCAGTCAATTCAGGTCAAGACTATTATCTAG 1746 0.4204 MVLKSMAVSASDLSLLRQYSVAKNPQVDLKNRFFVGRVMNLGFCCKGEKWKGNSGFKVRAAVEMGVEGTKSKALEGTFGLDVFSEGALMVKGFRGLRKTKLVCTVGPACSSLEDLEKLALGGMNVARLNMCHGTREWHRDVIRKIKKLNEEKGFSVSVMIDTEGSQIQCVDHGAASSVKVEEDSIWRFTAEHFEGSRPFTVQANYRGFSEGIEVGDELVIDGGMACFVVTEKTGNDLHCKCTDAGLFLPGAKFSFWRDGKLVRRNYELPTLSKKDWADIDFGIAEAVDFFALSFVNHADSIKDLKNYLSAKSTKSIKVLAKIESLESLHNLKEIVQASDGIMVARGDLGVEIPLEQIPTVQEDIIYICRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSFGQKALAVLDMASSRMESWSREENRQSLLNHHQLGVSLPDCITEQICNCAVEMANNLGVDAIFVYTKHGYMASLLSRNRPNPPIFAFTNDESTRLALNLQWGVVPLLVDLSEDAESNISKSVQLMKSKELISQGDVVLVVSDVAPTPTHMAFQSIQVKTII* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g03022 581 FunFam Pyruvate kinase 432 571 - -
Rops6g03022 581 NCBIfam pyruvate kinase 97 580 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops6g03022 581 Gene3D - 166 268 IPR015806 GO:0004743|GO:0006096
Rops6g03022 581 Gene3D - 99 429 IPR040442 -
Rops6g03022 581 PANTHER PYRUVATE KINASE 92 562 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops6g03022 581 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops6g03022 581 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops6g03022 581 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops6g03022 581 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops6g03022 581 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops6g03022 581 PRINTS Pyruvate kinase family signature 154 170 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops6g03022 581 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Rops6g03022 581 Pfam Pyruvate kinase, alpha/beta domain 464 563 IPR015795 -
Rops6g03022 581 FunFam Pyruvate kinase 270 436 - -
Rops6g03022 581 SUPERFAMILY PK C-terminal domain-like 458 566 IPR036918 -
Rops6g03022 581 SUPERFAMILY PK beta-barrel domain-like 171 250 IPR011037 -
Rops6g03022 581 Gene3D - 430 575 IPR036918 -
Rops6g03022 581 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 91 440 IPR015813 GO:0003824
Rops6g03022 581 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Rops6g03022 581 Pfam Pyruvate kinase, barrel domain 97 437 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g03022 Rops-Chr6 53273016 53276904 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g03022 K00873 - gmx:100780644 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g03022 6 53273016 53276904 Rops6g03022 6 53273016 53276904 ECH