Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02832 ATGATTAAAGAGGTTCTTCTTCTTCTGCTCTTCTTGGTCTCTGGATTGACCCTCTCAGTCTCAGAGTCCGAATCTGCTTCTTTACTACCTCATGCTGCTGAGTCCTTCAATATCAGCTATATCCAGATGAAGAACGCGGGGAGTTGTTCTTACTTGGTGGTTATATCTACTAGTTGTTCGTCTCCTAGGTATACAAGGGATCAAATCAGTATTGCTTTTGGAGATGCATATGACAACCAGATATATGTACCAAGACTGGATGATCCAGCTTCAGGTACATTTGAGAGCTGTTCTTCAGATACATTTCAGATAAATGGTCCATGTGCATATCAGATATGTTATGTGTACCTATATAGATCTGGATCGGATGGTTGGAAACCTGAAAGTGTGAAAATCAATAGTTATAATGGCAGGCCTGTTACTTTCTATTACAACACATTCATCCCCCGAGATACATGGTATGGGTTTAATTTGTGCAACGATGCTGCTTCTTCATACAAAGTAACTGCTCAGAAATGGCCTATATGTATGATTCTAGGATTGGTTCTTAGCTTTTGGTTGTAA 564 0.3972 MIKEVLLLLLFLVSGLTLSVSESESASLLPHAAESFNISYIQMKNAGSCSYLVVISTSCSSPRYTRDQISIAFGDAYDNQIYVPRLDDPASGTFESCSSDTFQINGPCAYQICYVYLYRSGSDGWKPESVKINSYNGRPVTFYYNTFIPRDTWYGFNLCNDAASSYKVTAQKWPICMILGLVLSFWL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02832 187 Gene3D PLAT/LH2 domain 47 156 - -
Rops6g02832 187 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 47 156 IPR036392 GO:0005515
Rops6g02832 187 Pfam Embryo-specific protein 3, (ATS3) 41 159 IPR010417 -
Rops6g02832 187 CDD PLAT 49 160 - -
Rops6g02832 187 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 6 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02832 Rops-Chr6 50816920 50818808 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02832 - - gmx:100499692 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02832 6 50816920 50818808 Rops6g02832 6 50816920 50818808 ECH