Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02818 ATGGCATTTTCATGTAGGCTTGACCACTTGATCCTCTCTGCGTTTAAACCCCAAAACTCCATTGTCCCATTTTCTTCAATCCCATGTCCTTCTTCATTGAGGTTTCAAAAGTTGCCATTCAGAATCATCCGCTATAATCCAACAACTATCAGAGCCACTTCTTCTACCACAACCATTGCTGAACCTGATGGCATTAAGATTAACTCGATTCCAACGAAACCCATTGAAGGACAAAAGACTGGTACCAGTGGGCTGCGAAAGAAGGTGAAAGTGTTTATGCAAGAAAATTACCTTGCAAATTGGATCCAGGCACTGTTTGATTCATTGCCTCCAGAGGATTACAAGAATGGTTTGTTGGTGTTGGGAGGTGATGGTCGATACTTTAATCGGGAAGCTGCACAGATAATAATCAAAATTGCTGCTGGAAACGGCGTAGGAAAAATTCTGGTTGGAAAGGAAGGTATATTGTCCACACCAGCCGTCTCTGCCGTGATAAGGAAGAGGAAGGCAAATGGTGGATTTGTTATGAGTGCAAGCCATAATCCTGGTGGGCCTGAATATGATTGGGGTATTAAGTTTAATTACAGTAGTGGACAACCTGCACCAGAATCCATCACTGACAAGATTTATGGAAACACCCTATCAATATCTGAGATAAAGATAGCTGACATTCCTAATGTTGACTTATCAACTGTCGGCGTCACAAAGTATGGAAGCTTCAGTGTGGAAGTAATAGATCCAGTTTCTGATTATCTGGAGCTAATGGAGACAGTATTTGATTTTCAGCTAATCAAAGGTCTTCTTTCACGGCCAGATTTTAGGTTTATATTTGATGCCATGCATGCAGTTGCTGGTGCTTATGCAAAACCTATCTTCATTGATAAACTTGGTGCTAGTCCGGATTCAATTTCAAATGGAATCCCTTTGGAAGATTTTGGACATGGGCATCCTGATCCTAATCTAACATATGCAAAGGATCTTGTCAACATTATGTATGCTGAAAATGGACCTGATTTCGGAGCTGCAAGTGATGGTGATGGTGATAGAAATATGATTTTAGGAAGTAGTTTCTTTGTAACTCCTTCAGACTCAGTAGCAGTTATTGCAGCCAATGCAAGAGAAGCCATTCCATACTTCAAGAACAGTGTTAAGGGCCTTGCTCGATCAATGCCAACAAGTGGTGCTCTGGATCGTGTTGCTGAAAAATTAAACCTTCCTTTCTATGAGGTCCCCACTGGTTGGAAATTTTTTGGGAATCTTATGGATGCTGGTAATTTGTCAATTTGCGGGGAAGAGAGTTTTGGAACAGGTTCCGATCATATACGTGAGAAAGACGGCATCTGGGCTGTATTAGCTTGGCTTTCTATTGTTGCACAACGCAACAAAGACAAGAAACCAGAGGAGAAATTGATCTCTGTATCTGATGTCGTGAAGGAGCACTGGGCAACTTATGGGAGAAATTTCTTTTCTAGATATGACTACGAGGAATGTGAATCTGAAGGTGCCAATAAGATGATAGAATACCTACGAGAGTGTGTGTCTAAGAGCAAGCCTGGTGATAAGTATGGAAGTTATGTCCTCCAGCTTGCAGATGATTTTACGTACACCGATCCTGTAGATGGAAGTGTGGTATCAAAACAAGGTGTTCGATATGTTTTCACAGATGGTTCAAGAATTATATATCGTTTATCGGGAACGGGTTCTGCTGGTGCAACTGTTAGAGTATACATTGAACAGTTTGAACCAGATGTCTCAAAACATGACGTTGATGCTCAAATTGCCTTAAAACCTTTAATAGATTTAGCATTATCTGTGTCAAAGCTCAAAGATTTCACAGGGAGGGAGAAGCCTACAGTCATCACATAA 1866 0.4105 MAFSCRLDHLILSAFKPQNSIVPFSSIPCPSSLRFQKLPFRIIRYNPTTIRATSSTTTIAEPDGIKINSIPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFDSLPPEDYKNGLLVLGGDGRYFNREAAQIIIKIAAGNGVGKILVGKEGILSTPAVSAVIRKRKANGGFVMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADIPNVDLSTVGVTKYGSFSVEVIDPVSDYLELMETVFDFQLIKGLLSRPDFRFIFDAMHAVAGAYAKPIFIDKLGASPDSISNGIPLEDFGHGHPDPNLTYAKDLVNIMYAENGPDFGAASDGDGDRNMILGSSFFVTPSDSVAVIAANAREAIPYFKNSVKGLARSMPTSGALDRVAEKLNLPFYEVPTGWKFFGNLMDAGNLSICGEESFGTGSDHIREKDGIWAVLAWLSIVAQRNKDKKPEEKLISVSDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRECVSKSKPGDKYGSYVLQLADDFTYTDPVDGSVVSKQGVRYVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDVDAQIALKPLIDLALSVSKLKDFTGREKPTVIT* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02818 621 Gene3D - 467 621 - -
Rops6g02818 621 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 78 217 IPR005844 GO:0005975|GO:0016868
Rops6g02818 621 SUPERFAMILY Phosphoglucomutase, C-terminal domain 486 621 IPR036900 GO:0016868|GO:0071704
Rops6g02818 621 Gene3D - 358 456 - -
Rops6g02818 621 SUPERFAMILY Phosphoglucomutase, first 3 domains 68 279 IPR016055 GO:0005975|GO:0016868
Rops6g02818 621 PRINTS Phosphoglucomutase/phosphomannomutase family signature 308 321 IPR005841 GO:0005975|GO:0016868
Rops6g02818 621 PRINTS Phosphoglucomutase/phosphomannomutase family signature 172 186 IPR005841 GO:0005975|GO:0016868
Rops6g02818 621 PRINTS Phosphoglucomutase/phosphomannomutase family signature 337 352 IPR005841 GO:0005975|GO:0016868
Rops6g02818 621 PRINTS Phosphoglucomutase/phosphomannomutase family signature 272 291 IPR005841 GO:0005975|GO:0016868
Rops6g02818 621 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 544 596 IPR005843 GO:0016868|GO:0071704
Rops6g02818 621 SUPERFAMILY Phosphoglucomutase, first 3 domains 345 491 IPR016055 GO:0005975|GO:0016868
Rops6g02818 621 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 65 621 IPR045244 GO:0004614|GO:0005975
Rops6g02818 621 FunFam Phosphoglucomutase 5 255 357 - -
Rops6g02818 621 FunFam Phosphoglucomutase 5 467 621 - -
Rops6g02818 621 FunFam Phosphoglucomutase 5 66 254 - -
Rops6g02818 621 Gene3D - 66 254 - -
Rops6g02818 621 FunFam Phosphoglucomutase, cytoplasmic 1 358 456 - -
Rops6g02818 621 SUPERFAMILY Phosphoglucomutase, first 3 domains 249 358 IPR016055 GO:0005975|GO:0016868
Rops6g02818 621 Gene3D - 255 357 - -
Rops6g02818 621 CDD PGM1 70 621 - -
Rops6g02818 621 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 361 484 IPR005846 GO:0005975|GO:0016868
Rops6g02818 621 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 173 182 IPR016066 GO:0000287
Rops6g02818 621 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 250 352 IPR005845 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02818 Rops-Chr6 50549859 50564738 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02818 K01835 - gmx:100802730 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02818 6 50549859 50564738 Rops6g02818 6 50549859 50564738 ECH