Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02807 ATGGGTTGGTTGTTCGCACAATTCATATGGGCATTTCTTGCTTGGAGCTTGTTCTCTGATGGCTTATCTTATTCTGCTAAAGCTCAAAAATACACATTTGTCAAAGAAGCAACTTCTGCTCCTCCAATCTCATCTTATGATTATATAGTCATTGGTGGAGGAACATGTGGGTGTCCACTAGCAGCAACTCTCTCACAAGGTGCCAGAGTTTTAGTCCTTGAAAGAGGAGGCTCTCCTTATACAAACCCAGAGAAAATTCACCTGAAGAACTATGTTAATACCCTCTCTGACATAAGTCCTTCATCTTTTGCCCAACAATTCATATCCAGAGATGGTGTCCTCAATGCCCGGGCTCGTGTCCTGGGTGGTGGGTCTGTCTTGAATGCCGGGTTCTACTCACGGGCTAGCCACAATTACATAAGGGAAGCTGGTTGGAATGAAACTTTGGCTGAGGACTCATATAAATGGGTTGAAAAGAAGTTGGTTTTTGAGCCTCCAATGCTGCAATGGCAATCAGCAGTGAGGGATGGGCTGCTGGAAGCAGGTGTGTTGCCTAACAATGGTTTTACTTTTGATCACTTGTATGGGACTAAGGTTGGAGGGTCAATTTTTGATAAGAATGGTGATAGGCACACTGCAGCTGATTTGTTAGAGTATGCTGATCCAAGGAGGATTTCTGTTTATATGCATGCCACTGTGCAGAAGATACTATTTAAGTATAATGGAGAAAAAAGGAGGCCACAAGCTTATGGAGTAATTTTCAAAGATGCATTTGGAATCATGCATAGAGCATTCTTAAGCGCGAAATCCAAGAATGAGATAATCTTATCAGCTGGTGCAATTGGAAGTCCACAGCTGTTGATGCTCAGTGGCATTGGTCCAGCTAACCATCTTCAGGCTCATGGAATCAAAGTGGTTTTGGATCAGCCTTTGGTGGGTCAAGGGATGGCAGATAATCCGATGAATGTTCTAGTGGTTCCTTCCCCTGAACCTGTTGAAGTCTCTCTCATCCAAACAGTTGGCATCACCAAGTTTGGTAGCTTCATTGAAACAGCCAGTGGATTGAGCATTGGCCATTCTTGGTCTGAAAGGCTTAAAGGGATTTTTGAATTTGTGTCAAACCAGAGTGGCCAACCCTCCATGTTTCCCCCTGAAGCCAAGGACAGCATTGCAGACACCATTAGATATTTATCCAATCCAACTCTTAAAGGAGGAATCATTCTTGAAAAGATCAAGGGACCACGGTCCACAGGTCATCTGGAGCTCCTAAACACTAATCCCAGTGATAATCCATCAGTTACCTTTAACTATTTCAAGGATCCAGAAGACTTAAGGATATGTGTTGAAGGCATGAAAACCATCATAAAAGTGATAAACTCTAAAGCATTCTCAAGGTTCCGTTATCAAAACATGCCGGTCCAAGCTCTAATAGACTTGATGGTGCACTTGCCAGTGAACTTGAGGCCAAAACATGCTAGTGCTGCATATTCTTTGGAACAGTATTGCATAGACACTGTCCTAACAATTTGGCATTACCATGGAGGCTGCCAACCTGGTAAGGTTGTTGATCATAATTATAAGGTTATTGGTGTAGAAGCTTTGAGAGTAATTGATGGATCCACCTTTTATCGCTCACCGGGAACTAATCCTCAAGCTACTGTAATGATGCTTGGAAGGTATATGGGAGAAAAGATTATACAGAAAAGATTCCCGGGGCAGAAGTGA 1725 0.429 MGWLFAQFIWAFLAWSLFSDGLSYSAKAQKYTFVKEATSAPPISSYDYIVIGGGTCGCPLAATLSQGARVLVLERGGSPYTNPEKIHLKNYVNTLSDISPSSFAQQFISRDGVLNARARVLGGGSVLNAGFYSRASHNYIREAGWNETLAEDSYKWVEKKLVFEPPMLQWQSAVRDGLLEAGVLPNNGFTFDHLYGTKVGGSIFDKNGDRHTAADLLEYADPRRISVYMHATVQKILFKYNGEKRRPQAYGVIFKDAFGIMHRAFLSAKSKNEIILSAGAIGSPQLLMLSGIGPANHLQAHGIKVVLDQPLVGQGMADNPMNVLVVPSPEPVEVSLIQTVGITKFGSFIETASGLSIGHSWSERLKGIFEFVSNQSGQPSMFPPEAKDSIADTIRYLSNPTLKGGIILEKIKGPRSTGHLELLNTNPSDNPSVTFNYFKDPEDLRICVEGMKTIIKVINSKAFSRFRYQNMPVQALIDLMVHLPVNLRPKHASAAYSLEQYCIDTVLTIWHYHGGCQPGKVVDHNYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEKIIQKRFPGQK* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02807 574 Coils Coil 573 574 - -
Rops6g02807 574 Gene3D - 46 558 IPR036188 -
Rops6g02807 574 Gene3D - 163 508 - -
Rops6g02807 574 PANTHER OSJNBA0019K04.7 PROTEIN 19 569 - -
Rops6g02807 574 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Rops6g02807 574 SUPERFAMILY FAD-linked reductases, C-terminal domain 316 515 - -
Rops6g02807 574 PIRSF Alcohol_oxidase 24 573 IPR012132 GO:0050660
Rops6g02807 574 Pfam GMC oxidoreductase 46 320 IPR000172 GO:0016614|GO:0050660
Rops6g02807 574 SUPERFAMILY FAD/NAD(P)-binding domain 45 569 IPR036188 -
Rops6g02807 574 ProSitePatterns GMC oxidoreductases signature 2. 279 293 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02807 Rops-Chr6 50370438 50373037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02807 3 569 Miscellaneous Gene Families AT5G51950 60.733 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02807 - - gmx:100780453 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02807 6 50370438 50373037 Rops6g02807 6 50370438 50373037 ECH