Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02779 ATGGCTAGGCGAGATGTTGAAAGTGGTGTTGGGGGAACTAAGAACAGAACAGAGGATAACAACTATTCTGCTCCTGCATCTTCCTATGTTTATGATACAGAAACTCATTGGACATCATGGCTTGTGCCTATGTTTGTGGTAGCTAATATAGCTGTTTTTGTTGTGGCCATGTACATCAATAATTGTCCAAAGCATAATCTTGGCCTCCAAGGTGATTGCGTGGCCAGTTTCCTAGGTAGATTCTCTTTTCAGCCTCTGCAGGAGAATCCTTTGCTTGGCCCTTCTTCCTCAACATTGACCAAGATGGGAGCCCTTCGGTGGGATAATATTGTGAACCGGCATCAGGGATGGAGACTTGTCACTTGCATTTGGTTACATGCTGGAATTATTCACTTGTTAGCAAACATGTTGAGCCTGGTCTTCATCGGCATTCGCCTTGAACAACAATTTGGGTTTCTGAGGATAGGAATCATATACCTGTTGTCTGGATTTGGTGGGAGTGTACTGTCTTCTCTTTTTATTAGAAACCACATCTCTGTTGGTGCTTCTGGTGCTCTTTTTGGACTTCTTGGAGCAATGCTGTCAGAACTTATCACAAACTGGACTATATATTCCAATAAAGCAATGGCTTTGGTCACCCTTCTGGTTATCATTGTCATCAACCTTGCCATTGGCATTTTACCACATGTTGATAATTTTGCTCATGTTGGGGGATTCCTGGTGGGATTTCTCCTTGGTTTCATTTTGCTGCCTCGTCCTCAATTTGGGTGGTTAGAGCAGCGACGTCTTCCTGCTGGTGTTCGCTTGAAGTCAAAGTACAAGCCTTACCAATATGTTCTAGGGATTGTCTCTCTAATTCTCTTGATAGCTGGGTTAACGGTTGCATTGGTGATGCTGTTCCGGGGTGAGAATGGGTATGATCGCTGCCATTGGTGTCGCTACCTAACATGTGTTCCAACTTCTAAGTGGGAATGCAACAGTGACACTTAA 990 0.4394 MARRDVESGVGGTKNRTEDNNYSAPASSYVYDTETHWTSWLVPMFVVANIAVFVVAMYINNCPKHNLGLQGDCVASFLGRFSFQPLQENPLLGPSSSTLTKMGALRWDNIVNRHQGWRLVTCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFLRIGIIYLLSGFGGSVLSSLFIRNHISVGASGALFGLLGAMLSELITNWTIYSNKAMALVTLLVIIVINLAIGILPHVDNFAHVGGFLVGFLLGFILLPRPQFGWLEQRRLPAGVRLKSKYKPYQYVLGIVSLILLIAGLTVALVMLFRGENGYDRCHWCRYLTCVPTSKWECNSDT* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02779 329 FunFam RHOMBOID-like protein 35 252 - -
Rops6g02779 329 Gene3D - 36 252 IPR035952 -
Rops6g02779 329 SUPERFAMILY Rhomboid-like 37 254 IPR035952 -
Rops6g02779 329 PANTHER RHOMBOID-RELATED 28 325 IPR002610 GO:0004252|GO:0006508|GO:0016020
Rops6g02779 329 Pfam Rhomboid family 111 253 IPR022764 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02779 Rops-Chr6 49928589 49931819 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02779 - - gmx:100809265 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02779 6 49928589 49931819 Rops6g02779 6 49928589 49931819 ECH