Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02759 ATGGTTAAGGTAACTATAGTTGGAAGGGCAAGCGATGGATTACCTCTTGCACATGGACTAAGATATATGAATGAAGAGAATGGCTATCTTTCATGTTATAGACAACAAGCAGAGTTCATACTCCAAGAAATTTCAAGGGGAGCATTGACAGCTTCCAAGATGACCATTCTCATTGATCATTACTGCTTCAACTACTTGGTCGACAATGGAGTTGTTTTCATTGTTTTATGTGAGTCCACGTACCCAAGAAAACTGGCTTTCCATTACCTACAAGATATACAAAAGGAGTTTGAGAAGTTTGATAAAACCCTTATAGGCAAAATCACAAGGCCATACAGCTTTATCAAATTCGATGGTATAATTACAAACTTTAGCAGACAATATATTGATATAAGAACTCAGGCCAACCTATCAAAACTTAATGTTAACCAGAAACAAGAGTTAGATATTGTTATTGAAGAAATGTCCAGCATTTTAGAAAGGGAGAGAAATTCAGAAACAATGAGAAGGTTACCGGTTACTCCTCAACCTGCATCCTCAATATGGTGTTCCCCACGCCTTGAGGTAGTAGATGATAGAGCCAAGAAGTTTGAAAAACTTGCCCTATTACCCCTTAATGCGCTAAATGACACTTGTGATGCCATACTGGTATAG 654 0.3777 MVKVTIVGRASDGLPLAHGLRYMNEENGYLSCYRQQAEFILQEISRGALTASKMTILIDHYCFNYLVDNGVVFIVLCESTYPRKLAFHYLQDIQKEFEKFDKTLIGKITRPYSFIKFDGIITNFSRQYIDIRTQANLSKLNVNQKQELDIVIEEMSSILERERNSETMRRLPVTPQPASSIWCSPRLEVVDDRAKKFEKLALLPLNALNDTCDAILV* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02759 217 Gene3D Longin domain 1 129 - -
Rops6g02759 217 CDD Longin 5 128 IPR010908 -
Rops6g02759 217 SMART Longin_2 36 120 IPR010908 -
Rops6g02759 217 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 189 IPR044565 GO:0005484|GO:0006888|GO:0006890
Rops6g02759 217 Pfam Regulated-SNARE-like domain 37 118 IPR010908 -
Rops6g02759 217 ProSiteProfiles Longin domain profile. 6 121 IPR010908 -
Rops6g02759 217 SUPERFAMILY SNARE-like 1 128 IPR011012 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02759 16 99 Miscellaneous Gene Families AT3G54300 30.952 1.72e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02759 K08517 - gmx:100781527 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02759 6 49577350 49579901 Rops6g02759 6 49577350 49579901 ECH